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2024-05-21 16:18:15

Gene list

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COG category: Replication, recombination and repair

Number of genes found: 1880

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Borrelia afzelii, PKo
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BAPKO_0813 hypothetical proteinPKO-g-P-chrIn1v1.w1 CDS810397 1047 - 0.222541
NA BAPKO_3514 hypothetical proteinPKO134-G-p-62.p179 CDS7706 597 + 0.241206
NA BAPKO_0667 small primase-like proteinPKO-g-P-chrIn1v1.w1 CDS660772 546 - 0.245421
NA BAPKO_5501 hypothetical proteinPKO72-g-a-32h02.s1 CDS1351 1377 - 0.342048
NA BAPKO_2508 hypothetical proteinPKO72-g-a-44e11.f1 CDS7447 3831 - 0.25372
NA BAPKO_3505 hypothetical proteinPKO134-G-p-62.p179 CDS2877 159 + 0.283019
NA BAPKO_4035 hypothetical proteinPKO72-g-a-43h03.f1 CDS21910 777 + 0.263835
NA BAPKO_4530 hypothetical proteinPKO72-g-a-9f08.f1 CDS25091 1356 - 0.371681
NA BAPKO_0196 conserved hypothetical proteinPKO-g-P-chrIn1v1.w1 CDS190968 807 - 0.277571
NA BAPKO_4522 hypothetical proteinPKO72-g-a-9f08.f1 CDS20905 1137 + 0.26825
NA BAPKO_3504 hypothetical proteinPKO134-G-p-62.p179 CDS2426 384 + 0.231771
NA BAPKO_3518 hypothetical proteinPKO134-G-p-62.p179 CDS9888 3213 + 0.252412
NA BAPKO_2527 hypothetical proteinPKO72-g-a-44e11.f1 CDS27194 3834 - 0.24361
NA BAPKO_6052 hypothetical proteinPKO134-g-b-13c07.f1 CDS980 78 - 0.320513
NA BAPKO_5526 hypothetical proteinPKO72-g-a-32h02.s1 CDS20545 2178 + 0.275023
NA BAPKO_2525 hypothetical proteinPKO72-g-a-44e11.f1 CDS25621 1176 - 0.25
NA BAPKO_0213 conserved hypothetical proteinPKO-g-P-chrIn1v1.w1 CDS207485 570 - 0.268421
NA BAPKO_3502 hypothetical proteinPKO134-G-p-62.p179 CDS1863 243 + 0.226337
NA BAPKO_3517 hypothetical proteinPKO134-G-p-62.p179 CDS9142 327 - 0.235474
NA BAPKO_3008 hypothetical proteinPKO72-g-a-39f06.r1 CDS6922 882 - 0.260771
NA BAPKO_4501 hypothetical proteinPKO72-g-a-9f08.f1 CDS699 228 - 0.236842
NA BAPKO_2006 antigen, S1PKO134-g-a-01h07.f1 CDS5488 1248 - 0.273237
NA BAPKO_5527 hypothetical proteinPKO72-g-a-32h02.s1 CDS22650 1131 + 0.266136
NA BAPKO_2069 hypothetical proteinPKO134-g-a-01h07.f1 CDS54670 756 - 0.261905
NA BAPKO_0099 DNA mismatch repair protein, putativePKO-g-P-chrIn1v1.w1 CDS94347 2337 - 0.260163
NA BAPKO_3011 hypothetical proteinPKO72-g-a-39f06.r1 CDS9826 318 - 0.232704
NA BAPKO_2065 hypothetical proteinPKO134-g-a-01h07.f1 CDS50661 777 - 0.279279
NA BAPKO_6050 hypothetical proteinPKO134-g-b-13c07.f1 CDS1 176 - 0.323864
NA BAPKO_0478 conserved hypothetical proteinPKO-g-P-chrIn1v1.w1 CDS478533 972 + 0.223251
dnaA BAPKO_0459 chromosomal replication initiator proteinPKO-g-P-chrIn1v1.w1 CDS460469 1458 + 0.283951
dnaB BAPKO_0112 replicative DNA helicasePKO-g-P-chrIn1v1.w1 CDS109328 1368 - 0.305556
dnaE BAPKO_0610 DNA polymerase III, subunit alphaPKO-g-P-chrIn1v1.w1 CDS596216 3486 + 0.3035
dnaG BAPKO_0755 DNA primasePKO-g-P-chrIn1v1.w1 CDS750141 1782 + 0.26936
dnaN BAPKO_0460 DNA polymerase III, subunit betaPKO-g-P-chrIn1v1.w1 CDS462159 1161 + 0.26615
dnaX BAPKO_0490 DNA polymerase III, subunits gamma and tauPKO-g-P-chrIn1v1.w1 CDS486587 1701 + 0.292181
exoA BAPKO_0559 exodeoxyribonuclease IIIPKO-g-P-chrIn1v1.w1 CDS546959 768 + 0.285156
gyrA BAPKO_0457 DNA gyrase, subunit APKO-g-P-chrIn1v1.w1 CDS455934 2433 - 0.312783
gyrB BAPKO_0458 DNA gyrase, subunit BPKO-g-P-chrIn1v1.w1 CDS458378 1905 - 0.31811
hbb BAPKO_0241 hbbU proteinPKO-g-P-chrIn1v1.w1 CDS236539 327 - 0.311927
hrpA BAPKO_0880 ATP-dependent helicasePKO-g-P-chrIn1v1.w1 CDS873629 2472 - 0.282362
lig BAPKO_0581 DNA ligasePKO-g-P-chrIn1v1.w1 CDS565973 1983 + 0.278366
mag BAPKO_0442 3-methyladenine DNA glycosylasePKO-g-P-chrIn1v1.w1 CDS444880 561 - 0.306595
mfd BAPKO_0663 transcription-repair coupling factorPKO-g-P-chrIn1v1.w1 CDS654189 3375 - 0.261333
mutL BAPKO_0218 DNA mismatch repair proteinPKO-g-P-chrIn1v1.w1 CDS214514 1836 + 0.270153
mutS BAPKO_0850 DNA mismatch repair proteinPKO-g-P-chrIn1v1.w1 CDS843020 2589 + 0.277327
napA-2 BAPKO_0735 neutrophil activating proteinPKO-g-P-chrIn1v1.w1 CDS734984 531 + 0.278719
nth BAPKO_0791 endonuclease IIIPKO-g-P-chrIn1v1.w1 CDS792921 645 + 0.272868
parC BAPKO_0035 DNA topoisomerase IVPKO-g-P-chrIn1v1.w1 CDS31948 1881 - 0.275917
parE BAPKO_0036 DNA topoisomerase IVPKO-g-P-chrIn1v1.w1 CDS33828 1800 - 0.292222
polA BAPKO_0577 DNA polymerase IPKO-g-P-chrIn1v1.w1 CDS561792 2670 - 0.282772
priA BAPKO_0013 primosomal protein NPKO-g-P-chrIn1v1.w1 CDS12503 1992 + 0.251506
recA BAPKO_0133 recA proteinPKO-g-P-chrIn1v1.w1 CDS125964 1098 - 0.359745
recB BAPKO_0676 exodeoxyribonuclease V, beta chainPKO-g-P-chrIn1v1.w1 CDS668766 3513 - 0.235981
recC BAPKO_0677 exodeoxyribonuclease V, gamma chainPKO-g-P-chrIn1v1.w1 CDS672284 3240 - 0.223148
recD BAPKO_0675 exodeoxyribonuclease V, alpha chainPKO-g-P-chrIn1v1.w1 CDS666937 1833 - 0.237316
recG BAPKO_0612 DNA recombinasePKO-g-P-chrIn1v1.w1 CDS600301 2061 + 0.311984
recJ BAPKO_0264 single-stranded-DNA-specific exonucleasePKO-g-P-chrIn1v1.w1 CDS262898 2121 + 0.247996
rep BAPKO_0640 rep helicase, single-stranded DNA-dependent ATPasePKO-g-P-chrIn1v1.w1 CDS636254 1980 + 0.267172
rnhB BAPKO_0046 ribonuclease HPKO-g-P-chrIn1v1.w1 CDS45227 546 + 0.272894
ruvA BAPKO_0022 Holliday junction DNA helicasePKO-g-P-chrIn1v1.w1 CDS21959 591 - 0.287648
ruvB BAPKO_0021 Holliday junction DNA helicasePKO-g-P-chrIn1v1.w1 CDS20856 1044 - 0.338123
sbcC BAPKO_0883 exonuclease SbcCPKO-g-P-chrIn1v1.w1 CDS879956 2841 + 0.253432
sbcD BAPKO_0882 exonuclease SbcDPKO-g-P-chrIn1v1.w1 CDS878728 1242 + 0.266506
smf BAPKO_0307 smf proteinPKO-g-P-chrIn1v1.w1 CDS304544 948 - 0.297468
ssb BAPKO_0115 single-stranded DNA-binding proteinPKO-g-P-chrIn1v1.w1 CDS111542 450 - 0.293333
topA BAPKO_0881 DNA topoisomerase IPKO-g-P-chrIn1v1.w1 CDS876103 2550 - 0.281569
ung BAPKO_0053 uracil DNA glycosylasePKO-g-P-chrIn1v1.w1 CDS49108 672 + 0.276786
uvrA BAPKO_0890 excinuclease ABC, subunit APKO-g-P-chrIn1v1.w1 CDS893869 2853 + 0.318962
uvrB BAPKO_0889 excinuclease ABC, subunit BPKO-g-P-chrIn1v1.w1 CDS891858 1995 + 0.310276
uvrC BAPKO_0481 excinuclease ABC, subunit CPKO-g-P-chrIn1v1.w1 CDS480235 1728 - 0.271412
uvrD BAPKO_0353 DNA helicasePKO-g-P-chrIn1v1.w1 CDS350147 2097 - 0.266094
 
Borrelia burgdorferi ZS7, ZS7
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BbuZS7_E11 putative plasmid partition proteinZS7_lp25 CDS11522 582 - 0.243986
NA BbuZS7_0036 DNA topoisomerase II (N- region) domain proteinchromosome CDS33989 1800 - 0.294444
NA BbuZS7_0879 type I restriction enzyme r protein (hsdr_n)chromosome CDS904409 1185 + 0.252321
NA BbuZS7_0858 putative Exonuclease SbcD homologchromosome CDS871220 1242 + 0.285024
NA BbuZS7_0428 DNA-3-methyladenine glycosylasechromosome CDS438783 561 - 0.311943
NA BbuZS7_0215 DNA mismatch repair protein MutLchromosome CDS214823 1803 + 0.276206
NA BbuZS7_0558 DNA polymerase I superfamily proteinchromosome CDS554040 2727 - 0.280895
NA BbuZS7_0098 MutS2 proteinchromosome CDS94559 2343 - 0.265472
NA BbuZS7_G33 putative replicative helicaseZS7_lp28-2 CDS27156 828 + 0.342995
NA BbuZS7_0035 DNA gyrase/topoisomerase IV, A subunit domain proteinchromosome CDS32109 1881 - 0.27698
NA BbuZS7_X37 BppCZS7_cp32-12 CDS25139 777 - 0.266409
NA BbuZS7_K41 immunogenic protein P37ZS7_lp36 CDS33107 999 - 0.3003
NA BbuZS7_AC27 conserved hypothetical proteinZS7_cp32-3+10 CDS18027 555 + 0.304505
NA BbuZS7_0032 conserved hypothetical proteinchromosome CDS29495 1473 + 0.253904
NA BbuZS7_A60 putative surface proteinZS7_lp54 CDS47453 792 - 0.300505
NA BbuZS7_AC63 BppCZS7_cp32-3+10 CDS43445 777 - 0.268983
NA BbuZS7_0462 DNA polymerase III, delta subunit superfamily proteinchromosome CDS470729 972 + 0.229424
NA BbuZS7_P40 BppCZS7_cp32-1 CDS25237 777 - 0.261261
NA BbuZS7_0859 exonuclease SbcCchromosome CDS872442 2853 + 0.260428
NA BbuZS7_E01 putative type I restriction/modofication enzymeZS7_lp25 CDS348 3834 - 0.243088
NA BbuZS7_0303 protein smfchromosome CDS305038 945 - 0.296296
NA BbuZS7_0856 ATP-dependent helicase HrpAchromosome CDS866125 2472 - 0.280744
NA BbuZS7_0592 DNA polymerase III subunit alphachromosome CDS588474 3486 + 0.307803
NA BbuZS7_0194 hydrolase, TatD family proteinchromosome CDS191215 810 - 0.280247
NA BbuZS7_0348 DNA helicasechromosome CDS350677 2097 - 0.262279
NA BbuZS7_0772 endonuclease IIIchromosome CDS785323 618 + 0.265372
NA BbuZS7_0793 conserved hypothetical proteinchromosome CDS802923 1047 - 0.234957
NA BbuZS7_AC25 BppCZS7_cp32-3+10 CDS15746 777 - 0.271557
NA BbuZS7_0473 DNA polymerase III, subunits gamma and tauchromosome CDS478695 1683 + 0.297089
NA BbuZS7_G01 putative lipoproteinZS7_lp28-2 CDS158 894 + 0.260626
NA BbuZS7_I29 conserved hypothetical proteinZS7_lp28-4 CDS26707 954 + 0.27673
NA BbuZS7_H02 transposase, family proteinZS7_lp28-3 CDS1132 468 + 0.245726
NA BbuZS7_0563 conserved hypothetical proteinchromosome CDS560222 1494 - 0.23427
NA BbuZS7_0654 exodeoxyribonuclease V, gamma chainchromosome CDS664533 3240 - 0.231481
NA BbuZS7_N41 BppCZS7_cp32-9 CDS24831 777 - 0.249678
NA BbuZS7_H19 type I restriction enzyme r protein (hsdr_n)ZS7_lp28-3 CDS20794 3837 + 0.248632
NA BbuZS7_0114 single-stranded DNA-binding protein (SSB)chromosome CDS111835 450 - 0.3
NA BbuZS7_A31 putative phage portal protein, HI1409 family proteinZS7_lp54 CDS25433 1227 + 0.308068
NA BbuZS7_0733 conserved hypothetical proteinchromosome CDS742341 1782 + 0.27385
NA BbuZS7_0211 putative methyltransferasechromosome CDS207780 570 - 0.264912
dnaA BbuZS7_0443 chromosomal replication initiator protein DnaAchromosome CDS452671 1464 + 0.278005
dnaB BbuZS7_0111 replicative DNA helicasechromosome CDS109622 1368 - 0.31652
dnaN BbuZS7_0444 DNA polymerase III, beta subunitchromosome CDS454375 1158 + 0.25475
gyrA BbuZS7_0441 DNA gyrase, A subunitchromosome CDS448135 2433 - 0.309083
gyrB BbuZS7_0442 DNA gyrase, B subunitchromosome CDS450579 1905 - 0.32126
hbb BbuZS7_0237 small DNA-binding protein Hbbchromosome CDS236996 327 - 0.318043
ligA BbuZS7_0562 DNA ligase, NAD-dependentchromosome CDS558219 1983 + 0.286939
mfd BbuZS7_0642 transcription-repair coupling factorchromosome CDS646424 3378 - 0.267318
mutS BbuZS7_0827 DNA mismatch repair protein MutSchromosome CDS835256 2589 + 0.281576
napA BbuZS7_0711 neutrophil activating protein A (napA)chromosome CDS727187 537 + 0.284916
pcrA BbuZS7_0621 ATP-dependent DNA helicase PcrAchromosome CDS628513 1980 + 0.280303
priA BbuZS7_0014 primosomal protein N'chromosome CDS12699 1983 + 0.262733
recA BbuZS7_0131 protein RecAchromosome CDS126265 1098 - 0.367942
recD BbuZS7_0652 exodeoxyribonuclease V, alpha subunitchromosome CDS659189 1833 - 0.24168
recG BbuZS7_0594 ATP-dependent DNA helicase RecGchromosome CDS592559 2061 + 0.307618
recJ BbuZS7_0260 single-stranded-DNA-specific exonuclease RecJchromosome CDS263353 2127 + 0.254819
rnhB BbuZS7_0045 ribonuclease HIIchromosome CDS45398 546 + 0.283883
ruvA BbuZS7_0023 holliday junction DNA helicase RuvAchromosome CDS22098 594 - 0.292929
ruvB BbuZS7_0022 holliday junction DNA helicase RuvBchromosome CDS21010 1044 - 0.33908
topA BbuZS7_0857 DNA topoisomerase Ichromosome CDS868599 2547 - 0.285434
ung BbuZS7_0054 uracil-DNA glycosylasechromosome CDS49293 672 + 0.28125
uvrA BbuZS7_0866 excinuclease ABC, A subunitchromosome CDS886332 2853 + 0.320365
uvrB BbuZS7_0865 excinuclease ABC, B subunitchromosome CDS884322 2007 + 0.3144
uvrC BbuZS7_0464 excinuclease ABC, C subunitchromosome CDS472361 1812 - 0.270419
xth BbuZS7_0541 exodeoxyribonuclease IIIchromosome CDS539137 768 + 0.309896
 
Borrelia burgdorferi, B31
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BB_0022 Holliday junction DNA helicase (ruvB)chromosome CDS21058 1044 - 0.342912
NA BB_0534 exodeoxyribonuclease III (exoA)chromosome CDS543049 768 + 0.311198
NA BB_0632 exodeoxyribonuclease V, alpha chain (recD)chromosome CDS663179 1833 - 0.242771
NA BB_0254 single-stranded-DNA-specific exonuclease (recJ)chromosome CDS263988 2127 + 0.255289
NA BB_0422 3-methyladenine DNA glycosylase (mag)chromosome CDS442688 561 - 0.311943
NA BB_0852 predicted coding region BB0852chromosome CDS908407 1185 + 0.253165
NA BB_0023 Holliday junction DNA helicase (ruvA)chromosome CDS22146 594 - 0.292929
NA BB_0211 DNA mismatch repair protein (mutL)chromosome CDS215427 1833 + 0.272231
NA BB_0437 chromosomal replication initiator protein (dnaA)chromosome CDS456576 1461 + 0.277892
NA BB_0014 primosomal protein N (priA)chromosome CDS12746 1983 + 0.263742
NA BB_0046 ribonuclease H (rnhB)chromosome CDS45446 546 + 0.283883
NA BB_G01 predicted coding region BBG01lp28-2 CDS116 894 + 0.258389
NA BB_Q67 adenine specific DNA methyltransferaselp56 CDS40436 3297 - 0.248408
NA BB_0232 hbbU proteinchromosome CDS237630 327 - 0.318043
NA BB_0053 uracil DNA glycosylase (ung)chromosome CDS49341 672 + 0.279762
NA BB_0765 predicted coding region BB0765chromosome CDS806920 1047 - 0.236867
NA BB_0552 DNA ligase (lig)chromosome CDS562185 1983 + 0.288452
NA BB_0114 single-stranded DNA-binding protein (ssb)chromosome CDS111889 450 - 0.302222
NA BB_G32 replicative DNA helicase, putativelp28-2 CDS27113 828 + 0.342995
NA BB_0710 DNA primase (dnaG)chromosome CDS746339 1572 + 0.272265
NA BB_0206 conserved hypothetical proteinchromosome CDS208084 570 - 0.264912
NA BB_0461 DNA polymerase III, subunits gamma and tau (dnaX)chromosome CDS482600 1683 + 0.297089
NA BB_K48 immunogenic protein P37, putativelp36 CDS30719 867 - 0.33218
NA BB_0836 excinuclease ABC, subunit B (uvrB)chromosome CDS888297 2022 + 0.309594
NA BB_0036 DNA topoisomerase IV (parE)chromosome CDS34037 1800 - 0.293889
NA BB_0633 exodeoxyribonuclease V, beta chain (recB)chromosome CDS665008 3510 - 0.237037
NA BB_H40 transposase-like protein, putativelp28-3 CDS26978 468 - 0.245726
NA BB_0032 predicted coding region BB0032chromosome CDS29543 1473 + 0.253904
NA BB_I33 predicted coding region BBI33lp28-4 CDS20482 111 + 0.315315
NA BB_K50 immunogenic protein P37lp36 CDS33081 999 - 0.299299
NA BB_K40 conserved hypothetical proteinlp36 CDS25103 555 + 0.311712
NA BB_0131 recA protein (recA)chromosome CDS126316 1098 - 0.369763
NA BB_0111 replicative DNA helicase (dnaB)chromosome CDS109675 1368 - 0.31652
NA BB_0626 conserved hypothetical proteinchromosome CDS656998 546 - 0.265568
NA BB_0435 DNA gyrase, subunit A (gyrA)chromosome CDS452040 2433 - 0.309083
NA BB_0035 DNA topoisomerase IV (parC)chromosome CDS32157 1881 - 0.278044
NA BB_K02 predicted coding region BBK02lp36 CDS1210 1269 - 0.299448
NA BB_0797 DNA mismatch repair protein (mutS)chromosome CDS839244 2589 + 0.280803
NA BB_0098 DNA mismatch repair protein, putativechromosome CDS94611 2343 - 0.266325
NA BB_0607 rep helicase, single-stranded DNA-dependent ATPase (rep)chromosome CDS632485 1980 + 0.280303
NA BB_0634 exodeoxyribonuclease V, gamma chain (recC)chromosome CDS668848 2916 - 0.230453
NA BB_0837 excinuclease ABC, subunit A (uvrA)chromosome CDS890322 2853 + 0.320365
NA BB_0827 ATP-dependent helicase (hrpA)chromosome CDS870112 2472 - 0.281149
NA BB_0457 excinuclease ABC, subunit C (uvrC)chromosome CDS476263 1812 - 0.271523
NA BB_0438 DNA polymerase III, subunit beta (dnaN)chromosome CDS458277 1158 + 0.256477
NA BB_0690 neutrophil activating protein (napA)chromosome CDS731151 570 + 0.275439
NA BB_0548 DNA polymerase I (polA)chromosome CDS558006 2727 - 0.280895
NA BB_0194 conserved hypothetical proteinchromosome CDS191518 810 - 0.280247
NA BB_0581 DNA recombinase (recG)chromosome CDS596531 2061 + 0.308103
NA BB_K03 predicted coding region BBK03lp36 CDS2818 405 - 0.219753
NA BB_0344 DNA helicase (uvrD)chromosome CDS351341 2100 - 0.262381
NA BB_K04 predicted coding region BBK04lp36 CDS3416 180 - 0.288889
NA BB_J46 predicted coding region BBJ46lp38 CDS34372 297 - 0.259259
NA BB_0553 predicted coding region BB0553chromosome CDS564188 1494 - 0.23494
NA BB_0436 DNA gyrase, subunit B (gyrB)chromosome CDS454484 1920 - 0.320833
NA BB_E02 predicted coding region BBE02lp25 CDS323 3834 - 0.244131
NA BB_0579 DNA polymerase III, subunit alpha (dnaE)chromosome CDS592446 3486 + 0.308376
NA BB_0297 smg proteinchromosome CDS305671 948 - 0.296414
NA BB_E18 conserved hypothetical proteinlp25 CDS11498 582 - 0.243986
NA BB_0745 endonuclease III (nth)chromosome CDS789270 669 + 0.252616
NA BB_0455 conserved hypothetical proteinchromosome CDS474613 990 + 0.231313
NA BB_0623 transcription-repair coupling factor (mfd)chromosome CDS650413 3378 - 0.269094
NA BB_A38 predicted coding region BBA38lp54 CDS25389 1242 + 0.305958
NA BB_0829 exonuclease SbcD (sbcD)chromosome CDS875207 1242 + 0.284219
NA BB_0830 exonuclease SbcC (sbcC)chromosome CDS876429 2853 + 0.260077
NA BB_I41 predicted coding region BBI41lp28-4 CDS25794 243 - 0.226337
NA BB_H09 predicted coding region BBH09lp28-3 CDS3892 3837 - 0.248371
bppC BB_P37 BppCcp32-1 CDS25040 777 - 0.259974
bppC BB_S40 BppCcp32-3 CDS25500 777 - 0.27027
bppC BB_Q45 BppClp56 CDS28730 777 - 0.274131
bppC BB_R38 BppCcp32-4 CDS24641 795 - 0.27044
bppC BB_L38 BppCcp32-8 CDS25175 777 - 0.261261
 
Borrelia duttonii Ly, Ly
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BDU_206 N6-adenine-specific methylasechromosome CDS218486 630 - 0.25873
NA BDU_454 DNA polymerase III delta subunitchromosome CDS487584 984 + 0.24187
NA BDU_212 uncharacterized conserved proteinchromosome CDS228101 1041 + 0.210375
NA BDU_1119 transposase IS605 OrfBpl165 CDS131793 1134 - 0.268959
NA BDU_1120 transposase-like proteinpl165 CDS132960 420 + 0.259524
NA BDU_232 HbbU proteinchromosome CDS248520 327 - 0.302752
NA BDU_1129 transposase IS605 OrfBpl165 CDS141539 1134 + 0.276896
NA BDU_16001 antigen P35-like protein, lipoproteinpl11 CDS974 852 + 0.284038
NA BDU_1045 transposase IS605 OrfBpl165 CDS52669 1134 + 0.269841
NA BDU_747 antigen, p83/100chromosome CDS801510 2250 + 0.292
NA BDU_2003 uncharacterized conserved proteinpl70 CDS3145 3390 - 0.346608
NA BDU_740 ATP-dependent helicase, DinG familychromosome CDS790784 2055 - 0.241849
NA BDU_192 Tatd, Mg-dependent DNasechromosome CDS201669 798 - 0.25188
NA BDU_769 DNA polymerase III gamma and tau subunitchromosome CDS822306 1044 - 0.215517
NA BDU_15004 transposase IS605 OrfBpl15 CDS3234 1140 + 0.269298
NA BDU_467 putative adenine-specific DNA methyltransferasechromosome CDS498299 825 + 0.24
NA BDU_19 uncharacterized conserved proteinchromosome CDS24184 570 + 0.208772
NA BDU_1038 transposase IS605 OrfBpl165 CDS44905 1140 - 0.276316
bdr BDU_11008 bdr proteinpl27 CDS6372 552 + 0.275362
bdr_1 BDU_9025 bdr proteinpl31 CDS20759 639 + 0.255086
bppC BDU_10010 BppCpl28 CDS8020 753 - 0.250996
bppC BDU_12008 BppCpl26 CDS6328 753 - 0.252324
bppC BDU_11004 BppCpl27 CDS2699 753 - 0.24834
dnaA BDU_434 chromosomal replication initiator proteinchromosome CDS468262 1455 + 0.263918
dnaB BDU_114 replicative DNA helicasechromosome CDS120767 1395 - 0.308961
dnaE BDU_582 DNA polymerase III, subunit alphachromosome CDS609216 3435 + 0.303639
dnaG BDU_714 DNA primasechromosome CDS758553 1776 + 0.265203
dnaN BDU_435 DNA polymerase III, subunit betachromosome CDS469980 1161 + 0.289406
dnaX BDU_463 DNA polymerase III, subunits gamma and tauchromosome CDS494903 1668 + 0.294964
exoA BDU_531 exodeoxyribonuclease IIIchromosome CDS555734 765 + 0.288889
gyrA BDU_432 DNA gyrase, subunit Achromosome CDS463666 2448 - 0.319036
gyrB BDU_433 DNA gyrase, subunit Bchromosome CDS466110 1920 - 0.317708
hrpA BDU_839 ATP-dependent helicasechromosome CDS894154 2487 - 0.267793
lig BDU_554 DNA ligasechromosome CDS577489 2010 + 0.281095
mag BDU_421 3-methyladenine DNA glycosylasechromosome CDS455468 591 - 0.279188
mfd BDU_627 transcription-repair coupling factorchromosome CDS663116 3378 - 0.2537
mutL BDU_211 DNA mismatch repair proteinchromosome CDS226245 1836 + 0.260893
mutS_1 BDU_101 DNA mismatch repair protein MutSchromosome CDS105498 2361 - 0.264295
mutS_2 BDU_805 DNA mismatch repair proteinchromosome CDS856675 2589 + 0.26883
napA_2 BDU_694 neutrophil activating proteinchromosome CDS742781 504 + 0.257937
nth BDU_750 endonuclease IIIchromosome CDS804099 618 + 0.263754
parC BDU_40 DNA topoisomerase IV, A subunitchromosome CDS43235 1884 - 0.268047
parE BDU_41 DNA topoisomerase IV, B subunitchromosome CDS45118 1797 - 0.284919
polA BDU_550 DNA polymerase Ichromosome CDS573324 2769 - 0.263633
priA BDU_20 primosomal protein Nchromosome CDS24746 1977 + 0.249368
recA BDU_135 recA proteinchromosome CDS138361 1092 - 0.343407
recB BDU_637 exodeoxyribonuclease V, beta chainchromosome CDS677379 3444 - 0.228513
recC BDU_638 exodeoxyribonuclease V, gamma chainchromosome CDS680829 3213 - 0.222533
recD BDU_636 exodeoxyribonuclease V, alpha chainchromosome CDS675544 1827 - 0.230432
recF BDU_436 DNA replication and repair protein RecFchromosome CDS471161 1068 + 0.263109
recG BDU_584 DNA recombinasechromosome CDS613244 2064 + 0.291667
recJ BDU_257 single-stranded-DNA-specific exonucleasechromosome CDS277935 2157 + 0.240612
recN BDU_313 ATPase involved in DNA repairchromosome CDS332210 1587 - 0.230624
recR BDU_465 recombination protein RecRchromosome CDS496876 585 + 0.295727
rnhB BDU_50 ribonuclease Hchromosome CDS56477 546 + 0.294872
ruvA BDU_29 Holliday junction DNA helicasechromosome CDS34158 591 - 0.265651
ruvB BDU_28 Holliday junction DNA helicasechromosome CDS33083 1023 - 0.324536
sbcC BDU_842 exonuclease SbcCchromosome CDS900477 2856 + 0.244748
sbcD BDU_841 exonuclease SbcDchromosome CDS899258 1233 + 0.262774
smf BDU_300 smf proteinchromosome CDS319848 945 - 0.301587
ssb BDU_9010 single stranded DNA-binding proteinpl31 CDS8004 474 - 0.305907
ssb BDU_10008 single-stranded DNA-binding proteinpl28 CDS6755 444 + 0.317568
ssb BDU_11002 single-stranded DNA-binding proteinpl27 CDS1591 426 + 0.305164
ssb BDU_12006 single-stranded DNA-binding proteinpl26 CDS4970 480 + 0.327083
ssb BDU_5021 single-stranded DNA-binding proteinpl40 CDS19626 462 - 0.292208
ssb BDU_117 single-stranded DNA-binding proteinchromosome CDS122991 441 - 0.326531
topA BDU_840 DNA topoisomerase Ichromosome CDS896644 2538 - 0.270686
ung BDU_57 uracil DNA glycosylasechromosome CDS60290 672 + 0.293155
uvrA BDU_850 excinuclease ABC, subunit Achromosome CDS915016 2841 + 0.31503
uvrB BDU_849 excinuclease ABC, subunit Bchromosome CDS913024 1965 + 0.298219
uvrC BDU_455 excinuclease ABC, subunit Cchromosome CDS488571 1809 - 0.249309
uvrD BDU_343 DNA helicasechromosome CDS365704 2097 - 0.269433
 
Borrelia garinii High passage (300), PBi
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA PBI300a21a10.s1_15 hypothetical proteinPBI300a21a10.s1 CDS11247 450 + 0.288889
NA NC_006156.1_297 smg proteinNC_006156.1 CDS304578 816 - 0.301471
NA G1Mb28h10.r1_23 hypothetical proteinG1Mb28h10.r1 CDS18634 492 + 0.270325
NA NT_108227.1_27 hypothetical proteinNT_108227.1 CDS21007 1113 + 0.21204
NA NC_006156.1_569 hypothetical proteinNC_006156.1 CDS583571 1773 + 0.249859
NA PBI300a20b10.r1_84 hypothetical proteinPBI300a20b10.r1 CDS53945 756 - 0.261905
NA NC_006156.1_664 hypothetical proteinNC_006156.1 CDS702932 357 + 0.352941
NA PBI300a20b10.r1_29 hypothetical proteinPBI300a20b10.r1 CDS19091 324 + 0.231481
NA NC_006156.1_75 hypothetical proteinNC_006156.1 CDS73318 1029 + 0.22449
NA NC_006156.1_13 hypothetical proteinNC_006156.1 CDS12004 591 + 0.233503
NA PBI300a20b10.r1_41 lipoproteinPBI300a20b10.r1 CDS27477 684 + 0.29386
NA PBI300PCR17p13_13 hypothetical proteinPBI300PCR17p13 CDS7462 3864 - 0.245342
NA NC_006156.1_745 antigen, p83/100NC_006156.1 CDS788888 2082 + 0.286263
NA NC_006156.1_69 hypothetical proteinNC_006156.1 CDS65600 1473 + 0.235574
NA NT_108230.1_16 hypothetical proteinNT_108230.1 CDS10989 114 - 0.201754
NA NT_108227.1_2 hypothetical proteinNT_108227.1 CDS427 696 - 0.258621
NA NC_006156.1_515 hypothetical proteinNC_006156.1 CDS518802 6489 + 0.256896
NA PBI300a01b12.s1_21 hypothetical proteinPBI300a01b12.s1 CDS17898 816 - 0.29902
NA NC_006156.1_161 hypothetical proteinNC_006156.1 CDS162672 1749 - 0.265294
NA NC_006156.1_629 small primase-like proteinNC_006156.1 CDS658914 549 - 0.260474
NA NC_006156.1_459 hypothetical proteinNC_006156.1 CDS476881 990 + 0.227273
NA NC_006156.1_651 serine/threonine kinase, putativeNC_006156.1 CDS688515 1689 - 0.23209
NA NC_006156.1_844 hypothetical proteinNC_006156.1 CDS898542 546 - 0.239927
NA G1a22e11.r1_37 hypothetical proteinG1a22e11.r1 CDS25151 417 + 0.266187
NA NC_006156.1_833 hypothetical proteinNC_006156.1 CDS877140 117 + 0.230769
NA NC_006156.1_237 hypothetical proteinNC_006156.1 CDS242881 771 - 0.290532
NA NT_108230.1_19 hypothetical proteinNT_108230.1 CDS11475 363 - 0.225895
NA NC_006156.1_735 hypothetical proteinNC_006156.1 CDS776539 786 + 0.291349
NA NC_006156.1_765 hypothetical proteinNC_006156.1 CDS808790 1047 - 0.227316
NA NC_006156.1_549 hypothetical proteinNC_006156.1 CDS562707 405 - 0.202469
NA PBI300a21a10.s1_16 hypothetical proteinPBI300a21a10.s1 CDS11934 1908 + 0.23847
NA PBI300a21a10.s1_14 hypothetical proteinPBI300a21a10.s1 CDS10228 825 + 0.252121
NA PBI300a34d11.s1_1 hypothetical proteinPBI300a34d11.s1 CDS1 708 - 0.254237
NA NC_006156.1_204 conserved hypothetical proteinNC_006156.1 CDS207678 375 - 0.258667
NA PBI300a20b10.r1_80 hypothetical proteinPBI300a20b10.r1 CDS50924 783 - 0.256705
NA NC_006156.1_191 conserved hypothetical proteinNC_006156.1 CDS191110 810 - 0.291358
NA NT_108227.1_31 hypothetical proteinNT_108227.1 CDS24438 3236 + 0.290173
NA NC_006156.1_724 hypothetical proteinNC_006156.1 CDS762100 1446 + 0.246888
NA PBI300a20b10.r1_10 antigen, S1PBI300a20b10.r1 CDS6480 1194 - 0.293132
NA PBI300a20b10.r1_81 hypothetical proteinPBI300a20b10.r1 CDS51939 708 - 0.261299
NA NC_006156.1_231 hbbU proteinNC_006156.1 CDS236578 327 - 0.302752
NA NC_006156.1_657 hypothetical proteinNC_006156.1 CDS695471 1143 + 0.24147
NA NC_006156.1_553 hypothetical proteinNC_006156.1 CDS566163 1488 - 0.227823
NA NC_006156.1_98 DNA mismatch repair protein, putativeNC_006156.1 CDS94444 2337 - 0.253744
NA NC_006156.1_73 hypothetical proteinNC_006156.1 CDS71030 1410 + 0.235461
dnaA NC_006156.1_440 chromosomal replication initiator proteinNC_006156.1 CDS458786 1455 + 0.276289
dnaB NC_006156.1_111 replicative DNA helicaseNC_006156.1 CDS109504 1368 - 0.304094
dnaE NC_006156.1_579 DNA polymerase III, subunit alphaNC_006156.1 CDS594379 3486 + 0.303787
dnaG NC_006156.1_713 DNA primaseNC_006156.1 CDS748231 1782 + 0.26936
dnaN NC_006156.1_441 DNA polymerase III, subunit betaNC_006156.1 CDS460481 1161 + 0.262705
dnaX NC_006156.1_465 DNA polymerase III, subunits gamma and tauNC_006156.1 CDS484948 1683 + 0.296494
exoA NC_006156.1_534 exodeoxyribonuclease IIINC_006156.1 CDS545224 768 + 0.296875
gyrA NC_006156.1_438 DNA gyrase, subunit ANC_006156.1 CDS454251 2433 - 0.318537
gyrB NC_006156.1_439 DNA gyrase, subunit BNC_006156.1 CDS456695 1905 - 0.32336
hrpA NC_006156.1_831 ATP-dependent helicaseNC_006156.1 CDS872039 2475 - 0.283232
lig NC_006156.1_552 DNA ligaseNC_006156.1 CDS564156 1983 + 0.28946
mag NC_006156.1_427 3-methyladenine DNA glycosylaseNC_006156.1 CDS443327 561 - 0.31016
mfd NC_006156.1_626 transcription-repair coupling factorNC_006156.1 CDS652342 3375 - 0.268741
mutL NC_006156.1_209 DNA mismatch repair proteinNC_006156.1 CDS214376 1836 + 0.25817
mutS NC_006156.1_800 DNA mismatch repair proteinNC_006156.1 CDS841164 2589 + 0.274623
napA-2 NC_006156.1_694 neutrophil activating proteinNC_006156.1 CDS733096 531 + 0.280603
nth NC_006156.1_746 endonuclease IIINC_006156.1 CDS791277 636 + 0.27044
parC NC_006156.1_35 DNA topoisomerase IVNC_006156.1 CDS32001 1881 - 0.272196
parE NC_006156.1_36 DNA topoisomerase IVNC_006156.1 CDS33881 1800 - 0.298889
polA NC_006156.1_548 DNA polymerase INC_006156.1 CDS559981 2730 - 0.271795
priA NC_006156.1_14 primosomal protein NNC_006156.1 CDS12587 1983 + 0.256178
recA NC_006156.1_132 recA proteinNC_006156.1 CDS126148 1089 - 0.349862
recB NC_006156.1_636 exodeoxyribonuclease V, beta chainNC_006156.1 CDS666939 3507 - 0.233248
recC NC_006156.1_637 exodeoxyribonuclease V, gamma chainNC_006156.1 CDS670451 3240 - 0.221605
recD NC_006156.1_635 exodeoxyribonuclease V, alpha chainNC_006156.1 CDS665110 1833 - 0.229133
recG NC_006156.1_581 DNA recombinaseNC_006156.1 CDS598464 2061 + 0.306162
recJ NC_006156.1_253 single-stranded-DNA-specific exonucleaseNC_006156.1 CDS262783 2127 + 0.253409
rep NC_006156.1_608 rep helicase, single-stranded DNA-dependent ATPaseNC_006156.1 CDS634430 1977 + 0.273141
rnhB NC_006156.1_45 ribonuclease HNC_006156.1 CDS45305 546 + 0.276557
ruvA NC_006156.1_23 Holliday junction DNA helicaseNC_006156.1 CDS22008 591 - 0.304569
ruvB NC_006156.1_22 Holliday junction DNA helicaseNC_006156.1 CDS20920 1044 - 0.341954
sbcC NC_006156.1_835 exonuclease SbcCNC_006156.1 CDS878369 2847 + 0.247278
sbcD NC_006156.1_834 exonuclease SbcDNC_006156.1 CDS877192 1191 + 0.27288
ssb NC_006156.1_114 single-stranded DNA-binding proteinNC_006156.1 CDS111718 450 - 0.3
topA NC_006156.1_832 DNA topoisomerase INC_006156.1 CDS874516 2550 - 0.28
ung NC_006156.1_51 uracil DNA glycosylaseNC_006156.1 CDS49182 672 + 0.28125
uvrA NC_006156.1_842 excinuclease ABC, subunit ANC_006156.1 CDS892277 2853 + 0.322818
uvrB NC_006156.1_841 excinuclease ABC, subunit BNC_006156.1 CDS890266 1995 + 0.305764
uvrC NC_006156.1_461 excinuclease ABC, subunit CNC_006156.1 CDS478587 1743 - 0.263913
uvrD NC_006156.1_340 DNA helicaseNC_006156.1 CDS350084 2097 - 0.260372
 
Borrelia garinii, PBi
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BG0076 hypothetical proteinchromosome linear CDS73319 1029 + 0.22449
NA BG0729 hypothetical proteinchromosome linear CDS744639 1773 + 0.258319
NA BG0755 hypothetical proteinchromosome linear CDS776543 786 + 0.291349
NA BG0684 hypothetical proteinchromosome linear CDS702937 357 + 0.352941
NA BG0241 hypothetical proteinchromosome linear CDS242882 771 - 0.290532
NA BGA30 lipoproteinlp54 CDS24377 684 + 0.29386
NA BG0765 antigen, p83/100chromosome linear CDS788892 2082 + 0.286263
NA BG0074 hypothetical proteinchromosome linear CDS71031 1410 + 0.235461
NA BG0161 hypothetical proteinchromosome linear CDS162673 1749 - 0.265294
NA BG0301 smg proteinchromosome linear CDS304538 858 - 0.300699
NA BG0563 hypothetical proteinchromosome linear CDS566167 1488 - 0.227823
NA BGA71 hypothetical proteinlp54 CDS50845 756 - 0.261905
NA BG0671 serine/threonine kinase, putativechromosome linear CDS688521 1689 - 0.23209
NA BGA72 conserved hypothetical proteinlp54 CDS51911 774 - 0.268734
NA BG0559 hypothetical proteinchromosome linear CDS562711 405 - 0.202469
NA BG0208 conserved hypothetical proteinchromosome linear CDS207679 540 - 0.27963
NA BG0038 hypothetical proteinchromosome linear CDS36448 1539 - 0.252762
NA BG0646 small primase-like proteinchromosome linear CDS658919 549 - 0.260474
NA BGA20 conserved hypothetical proteinlp54 CDS15991 324 + 0.231481
NA BG0099 DNA mismatch repair protein, putativechromosome linear CDS94445 2337 - 0.253316
NA BG0013 hypothetical proteinchromosome linear CDS12004 591 + 0.233503
NA BG0070 hypothetical proteinchromosome linear CDS65601 1473 + 0.235574
NA BGA04 antigen, S1lp54 CDS3380 1194 - 0.293132
NA BG0865 hypothetical proteinchromosome linear CDS898546 546 - 0.239927
NA BG0523 hypothetical proteinchromosome linear CDS518806 6489 + 0.25705
NA BG0235 hbbU proteinchromosome linear CDS236579 327 - 0.302752
NA BG0464 conserved hypothetical proteinchromosome linear CDS476884 990 + 0.227273
NA BGA68 conserved hypothetical proteinlp54 CDS48839 708 - 0.261299
NA BG0744 hypothetical proteinchromosome linear CDS762105 1446 + 0.246888
NA BGA19 conserved hypothetical proteinlp54 CDS14524 573 + 0.267016
NA BG0192 conserved hypothetical proteinchromosome linear CDS191111 810 - 0.291358
NA BG0579 hypothetical proteinchromosome linear CDS583575 1773 + 0.249859
NA BG0788 hypothetical proteinchromosome linear CDS808794 1047 - 0.227316
NA BG0677 hypothetical proteinchromosome linear CDS695477 1143 + 0.24147
BGP001 hypothetical proteinG1a19d06.s1 CDS427 696 - 0.258621
BGP051 hypothetical proteinG11a17h03.s1 CDS15713 492 + 0.270325
BGP104 hypothetical proteinG1a08d08.s1 CDS11475 363 - 0.225895
BGP109 hypothetical proteinG1a34h09.s1 CDS1 572 - 0.246504
BGP199 hypothetical proteinG1a07d05.r1 CDS2140 3585 - 0.247699
BGP220 hypothetical proteinG11a16d07.r1 CDS3806 816 - 0.29902
BGP294 hypothetical proteinG1a07g11.r1 CDS435 1908 - 0.23847
BGP295 hypothetical proteinG1a07g11.r1 CDS2580 450 - 0.288889
BGP316 hypothetical proteinG1a13d06.s1 CDS1 2417 - 0.299131
dnaA BG0444 chromosomal replication initiator proteinchromosome linear CDS458789 1455 + 0.276289
dnaB BG0112 replicative DNA helicasechromosome linear CDS109505 1368 - 0.304094
dnaE BG0591 DNA polymerase III, subunit alphachromosome linear CDS594425 3444 + 0.306039
dnaG BG0733 DNA primasechromosome linear CDS748236 1782 + 0.26936
dnaN BG0445 DNA polymerase III, subunit betachromosome linear CDS460484 1161 + 0.262705
dnaX BG0474 DNA polymerase III, subunits gamma and tauchromosome linear CDS484951 1683 + 0.296494
exoA BG0542 exodeoxyribonuclease IIIchromosome linear CDS545228 768 + 0.296875
gyrA BG0442 DNA gyrase, subunit Achromosome linear CDS454254 2433 - 0.318537
gyrB BG0443 DNA gyrase, subunit Bchromosome linear CDS456698 1905 - 0.32336
hrpA BG0852 ATP-dependent helicasechromosome linear CDS872044 2475 - 0.283636
lig BG0562 DNA ligasechromosome linear CDS564160 1983 + 0.28946
mag BG0429 3-methyladenine DNA glycosylasechromosome linear CDS443330 561 - 0.31016
mfd BG0642 transcription-repair coupling factorchromosome linear CDS652347 3375 - 0.268741
mutL BG0213 DNA mismatch repair proteinchromosome linear CDS214377 1836 + 0.25817
mutS BG0823 DNA mismatch repair proteinchromosome linear CDS841169 2589 + 0.274623
napA-2 BG0714 neutrophil activating proteinchromosome linear CDS733101 531 + 0.280603
nth BG0768 endonuclease IIIchromosome linear CDS791299 618 + 0.276699
parC BG0035 DNA topoisomerase IVchromosome linear CDS32002 1881 - 0.272196
parE BG0036 DNA topoisomerase IVchromosome linear CDS33882 1800 - 0.298889
polA BG0558 DNA polymerase Ichromosome linear CDS559985 2730 - 0.271795
priA BG0014 primosomal protein Nchromosome linear CDS12587 1983 + 0.256178
recA BG0133 recA proteinchromosome linear CDS126149 1089 - 0.349862
recB BG0655 exodeoxyribonuclease V, beta chainchromosome linear CDS666945 3507 - 0.233248
recC BG0656 exodeoxyribonuclease V, gamma chainchromosome linear CDS670457 3240 - 0.221914
recD BG0654 exodeoxyribonuclease V, alpha chainchromosome linear CDS665116 1833 - 0.229133
recG BG0593 DNA recombinasechromosome linear CDS598468 2061 + 0.306162
recJ BG0257 single-stranded-DNA-specific exonucleasechromosome linear CDS262784 2127 + 0.253409
rep BG0620 rep helicase, single-stranded DNA-dependent ATPasechromosome linear CDS634435 1977 + 0.274153
rnhB BG0045 ribonuclease Hchromosome linear CDS45306 546 + 0.276557
ruvA BG0023 Holliday junction DNA helicasechromosome linear CDS22008 591 - 0.304569
ruvB BG0022 Holliday junction DNA helicasechromosome linear CDS20920 1044 - 0.341954
sbcC BG0855 exonuclease SbcCchromosome linear CDS878373 2847 + 0.247278
sbcD BG0854 exonuclease SbcDchromosome linear CDS877145 1242 + 0.273752
ssb BG0115 single-stranded DNA-binding proteinchromosome linear CDS111719 450 - 0.3
topA BG0853 DNA topoisomerase Ichromosome linear CDS874521 2550 - 0.28
ung BG0052 uracil DNA glycosylasechromosome linear CDS49183 672 + 0.28125
uvrA BG0862 excinuclease ABC, subunit Achromosome linear CDS892281 2853 + 0.322818
uvrB BG0861 excinuclease ABC, subunit Bchromosome linear CDS890270 1995 + 0.305764
uvrC BG0466 excinuclease ABC, subunit Cchromosome linear CDS478590 1743 - 0.263913
uvrD BG0345 DNA helicasechromosome linear CDS350086 2097 - 0.262279
 
Borrelia hermsii DAH, DAH
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BH0829 exonuclease SbcDchromosome CDS890396 1233 + 0.273317
NA BH0827 ATP-dependent protease Lachromosome CDS885294 2487 - 0.282268
NA BH0830 exonuclease SbcCchromosome CDS891528 2937 + 0.266599
NA BH0036 hypothetical proteinchromosome CDS33906 1797 - 0.30384
NA BH0548 DNA polymerase Ichromosome CDS566227 2718 - 0.29507
NA BH0634 exodeoxyribonuclease V gamma chainchromosome CDS675121 3222 - 0.2545
NA BH0232 DNA-binding protein HbbUchromosome CDS236831 327 - 0.299694
NA BH0438A DNA replication and repair protein RecFchromosome CDS463093 1068 + 0.285581
NA BH0836 excinuclease ABC subunit Bchromosome CDS904154 1965 + 0.308906
NA BH0422 putative 3-methyladenine DNA glycosylasechromosome CDS445895 597 - 0.319933
NA BH0435 DNA gyrase subunit Achromosome CDS455622 2433 - 0.325113
NA BH0014 primosomal protein N'chromosome CDS13047 1977 + 0.274659
NA BH0710 DNA primasechromosome CDS753658 1782 + 0.309764
NA BH0690 neutrophil-activating protein Achromosome CDS737405 534 + 0.286517
NA BH0344 DNA helicase IIchromosome CDS354735 2094 - 0.292264
NA BH0046 ribonuclease HIIchromosome CDS45193 546 + 0.285714
NA BH0461 DNA polymerase III subunit gamma/tauchromosome CDS486982 1653 + 0.30611
NA BH0455 hypothetical cytosolic proteinchromosome CDS479552 984 + 0.240854
NA BH0022 Holliday junction DNA helicase RuvBchromosome CDS21363 1059 - 0.344665
NA BH0633 exodeoxyribonuclease V beta chainchromosome CDS671676 3474 - 0.259643
NA BH0632 exodeoxyribonuclease V alpha chainchromosome CDS669840 1827 - 0.252874
NA BH0660A hypothetical proteinchromosome CDS707266 357 + 0.322129
NA BH0463A modification methylase LlaDCHIAchromosome CDS490263 819 + 0.260073
NA BH0797 DNA mismatch repair protein MutSchromosome CDS852853 2586 + 0.300464
NA BH0131 RecA proteinchromosome CDS127022 1071 - 0.358543
NA BH0579 DNA polymerase III alpha subunitchromosome CDS602478 3444 + 0.324913
NA BH0111 replicative DNA helicasechromosome CDS109543 1386 - 0.328283
NA BH0309A DNA repair protein RecNchromosome CDS320697 1659 - 0.317661
NA BH0534 exodeoxyribonuclease IIIchromosome CDS548758 762 + 0.325459
NA BH0512 hypothetical membrane associated proteinchromosome CDS521700 7200 + 0.296667
NA BH0211 DNA mismatch repair protein MutLchromosome CDS214488 1839 + 0.290375
NA BH0837 excinuclease ABC subunit Achromosome CDS906145 2841 + 0.335797
NA BH0745 endonuclease IIIchromosome CDS800065 636 + 0.259434
NA BH0552 NAD-dependent DNA ligasechromosome CDS570356 2010 + 0.318408
NA BH0623 transcription-repair coupling factorchromosome CDS657358 3369 - 0.28881
NA BH0765 DNA polymerase III subunit gamma/tauchromosome CDS818404 1044 - 0.23659
NA BH0035 hypothetical proteinchromosome CDS32023 1884 - 0.29724
NA BH0436 DNA gyrase subunit Bchromosome CDS458066 1920 - 0.342187
NA BH0023 Holliday junction DNA helicase RuvAchromosome CDS22473 591 - 0.304569
NA BH0462A recombination protein RecRchromosome CDS488941 585 + 0.319658
NA BH0438 DNA polymerase III, beta chainchromosome CDS461913 1161 + 0.306632
NA BH0457 excinuclease ABC subunit Cchromosome CDS480629 1809 - 0.272526
NA BH0735A ATP-dependent helicase, DinG familychromosome CDS785987 2058 - 0.265792
NA BH0254 single-stranded-DNA-specific exonuclease RecJchromosome CDS266521 2115 + 0.269504
NA BH0194 sec-independent protein translocase protein TatDchromosome CDS190322 798 - 0.279449
NA BH0297 Smf proteinchromosome CDS308358 945 - 0.313228
NA BH0053 uracil-DNA glycosylasechromosome CDS49033 672 + 0.297619
NA BH0437 chromosomal replication initiator protein DnaAchromosome CDS460217 1455 + 0.282474
NA BH0581 ATP-dependent DNA helicase RecGchromosome CDS606514 2064 + 0.305717
NA BH0098 MutS2 proteinchromosome CDS94221 2361 - 0.276578
NA BH0828 DNA topoisomerase Ichromosome CDS887784 2538 - 0.286446
NA BH0206 methyltransferasechromosome CDS207140 573 - 0.322862
NA BH0114 single-strand DNA binding proteinchromosome CDS111757 438 - 0.356164
 
Borrelia recurrentis A1, A1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BRE_1038 transposase IS605 OrfBpl124 CDS39396 1134 - 0.268078
NA BRE_1039 transposase IS200-like proteinpl124 CDS40563 420 + 0.259524
NA BRE_3002 antigen P35-like proteinpl37 CDS1073 852 + 0.282864
NA BRE_18 uncharacterized conserved proteinchromosome CDS25052 570 + 0.208772
NA BRE_231 HbbU proteinchromosome CDS249477 327 - 0.302752
NA BRE_743 ATP-dependent helicase, DinG familychromosome CDS797416 2055 - 0.241849
NA BRE_211 uncharacterized conserved proteinchromosome CDS229058 1041 + 0.212296
NA BRE_457 DNA polymerase III delta subunitchromosome CDS494306 984 + 0.242886
NA BRE_772 DNA polymerase III gamma and tau subunitchromosome CDS828937 1044 - 0.217433
NA BRE_757 uncharaterized conserved proteinchromosome CDS813781 1572 + 0.284351
NA BRE_205 N6-adenine-specific methylase, putativechromosome CDS219364 597 - 0.257956
NA BRE_470 putative adenine-specific DNA methyltransferasechromosome CDS505022 825 + 0.238788
NA BRE_191 Tatd, Mg-dependent DNasechromosome CDS202547 798 - 0.249373
bdr_1 BRE_4005 bdr proiteinpl35 CDS6301 693 - 0.264069
bppC_2 BRE_2026 BppCpl53 CDS20104 753 - 0.233732
dnaA BRE_437 chromosomal replication initiator proteinchromosome CDS474985 1455 + 0.26323
dnaB BRE_113 replicative DNA helicasechromosome CDS121645 1395 - 0.311111
dnaE BRE_585 DNA polymerase III, subunit alphachromosome CDS615828 3435 + 0.301892
dnaG BRE_717 DNA primasechromosome CDS765181 1776 + 0.26464
dnaN BRE_438 DNA polymerase III, subunit betachromosome CDS476703 1161 + 0.285099
dnaX BRE_466 DNA polymerase III, gamma and tau subunitschromosome CDS501628 1668 + 0.294365
exoA BRE_534 exodeoxyribonuclease IIIchromosome CDS562354 765 + 0.286275
gyrA BRE_435 DNA gyrase, subunit Achromosome CDS470388 2448 - 0.31781
gyrB BRE_436 DNA gyrase, subunit Bchromosome CDS472832 1920 - 0.316667
hrpA BRE_837 ATP-dependent helicasechromosome CDS895689 2487 - 0.264174
lig BRE_557 DNA ligasechromosome CDS584100 2010 + 0.277114
mag BRE_425 3-methyladenine DNA glycosylasechromosome CDS463216 591 - 0.270728
mfd BRE_630 transcription-repair coupling factorchromosome CDS669740 3378 - 0.2537
mutL BRE_210 DNA mismatch repair proteinchromosome CDS227202 1836 + 0.25817
mutS BRE_808 DNA mismatch repair proteinchromosome CDS863306 2589 + 0.269216
napA_2 BRE_697 neutrophil activating proteinchromosome CDS749410 504 + 0.259921
nth BRE_753 endonuclease IIIchromosome CDS810730 618 + 0.263754
parC BRE_39 DNA topoisomerase IVchromosome CDS44104 1884 - 0.268047
parE BRE_40 DNA topoisomerase IVchromosome CDS45987 1797 - 0.28158
polA BRE_553 DNA polymerase Ichromosome CDS579935 2769 - 0.26255
priA BRE_19 primosomal protein Nchromosome CDS25614 1977 + 0.249368
recB BRE_640 exodeoxyribonuclease V, beta chainchromosome CDS684003 3444 - 0.230256
recC BRE_641 exodeoxyribonuclease V, gamma chainchromosome CDS687453 3213 - 0.221911
recD BRE_639 exodeoxyribonuclease V, alpha chainchromosome CDS682168 1827 - 0.230432
recF BRE_439 DNA replication and repair protein RecFchromosome CDS477884 1068 + 0.259363
recG BRE_587 DNA recombinasechromosome CDS619856 2064 + 0.289729
recJ1 BRE_256 single-stranded-DNA-specific exonucleasechromosome CDS278886 2160 + 0.239352
recN BRE_317 ATPase involved in DNA repairchromosome CDS339943 1587 - 0.228103
recR BRE_468 recombination protein RecRchromosome CDS503601 585 + 0.294017
rnhB BRE_49 ribonuclease Hchromosome CDS57348 546 + 0.296703
ruvA BRE_28 Holliday junction DNA helicasechromosome CDS35026 591 - 0.265651
ruvB BRE_27 Holliday junction DNA helicasechromosome CDS33951 1023 - 0.325513
sbcC BRE_840 exonuclease SbcCchromosome CDS902012 2856 + 0.242997
sbcD BRE_839 exonuclease SbcDchromosome CDS900793 1233 + 0.264396
ssb BRE_116 single-stranded DNA-binding proteinchromosome CDS123869 441 - 0.326531
topA BRE_838 DNA topoisomerase Ichromosome CDS898179 2538 - 0.27108
ung BRE_56 uracil DNA glycosylasechromosome CDS61174 672 + 0.290179
uvrA BRE_848 excinuclease ABC, subunit Achromosome CDS916557 2841 + 0.31503
uvrB BRE_847 excinuclease ABC, subunit Bchromosome CDS914565 1965 + 0.296692
uvrC BRE_458 excinuclease ABC, subunit Cchromosome CDS495293 1809 - 0.247098
uvrD BRE_347 DNA helicasechromosome CDS373432 2097 - 0.265141
 
Borrelia turicatae 91E135, 91E135
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BT0232 DNA-binding protein HbbUchromosome CDS236225 327 - 0.299694
NA BT0194 sec-independent protein translocase protein TatDchromosome CDS190041 798 - 0.265664
NA BT0765 DNA polymerase III subunit gamma/tauchromosome CDS814802 1044 - 0.239464
NA BT0829 exonuclease SbcDchromosome CDS886746 1233 + 0.282238
NA BT0579 DNA polymerase III alpha subunitchromosome CDS599501 3453 + 0.319432
NA BT0633 exodeoxyribonuclease V beta chainchromosome CDS669041 3444 - 0.243902
NA BT0309A DNA repair protein RecNchromosome CDS319990 1677 - 0.304711
NA BT0581 ATP-dependent DNA helicase RecGchromosome CDS603541 2070 + 0.296135
NA BT0623 transcription-repair coupling factorchromosome CDS654783 3369 - 0.277234
NA BT0462A recombination protein RecRchromosome CDS486334 585 + 0.324786
NA BT0111 replicative DNA helicasechromosome CDS109514 1386 - 0.323232
NA BT0022 Holliday junction DNA helicase RuvBchromosome CDS21060 1044 - 0.34387
NA BT0438A DNA replication and repair protein RecFchromosome CDS460519 1077 + 0.287837
NA BT0690 neutrophil-activating protein Achromosome CDS734695 525 + 0.28381
NA BT0837 excinuclease ABC subunit Achromosome CDS902582 2841 + 0.323478
NA BT0745 endonuclease IIIchromosome CDS796457 681 + 0.271659
NA BT0046 ribonuclease HIIchromosome CDS45014 549 + 0.287796
NA BT0436 DNA gyrase subunit Bchromosome CDS455500 1920 - 0.334375
NA BT0098 DNA mismatch repair protein MutSchromosome CDS94145 2361 - 0.277425
NA BT0534 exodeoxyribonuclease IIIchromosome CDS545813 759 + 0.312253
NA BT0461 DNA polymerase III subunit gamma/tauchromosome CDS484378 1647 + 0.306618
NA BT0180 flagellar protein FlbFchromosome CDS181397 495 + 0.248485
NA BT0211 DNA mismatch repair protein MutLchromosome CDS213926 1839 + 0.283306
NA BT0114 single-strand DNA binding proteinchromosome CDS111726 438 - 0.342466
NA BT0548 DNA polymerase Ichromosome CDS563172 2760 - 0.282246
NA BT0457 excinuclease ABC subunit Cchromosome CDS478027 1809 - 0.274737
NA BT0830 exonuclease SbcCchromosome CDS887878 2937 + 0.255363
NA BT0014 primosomal protein N'chromosome CDS12748 1977 + 0.257967
NA BT0797 DNA mismatch repair protein MutSchromosome CDS849188 2583 + 0.286489
NA BT0209 mucin 2 precursorchromosome CDS209891 1689 + 0.282416
NA BT0023 Holliday junction DNA helicase RuvAchromosome CDS22158 591 - 0.304569
NA BT0512 hypothetical membrane associated proteinchromosome CDS519131 6906 + 0.289458
NA BT0552 NAD-dependent DNA ligasechromosome CDS567318 2031 + 0.295913
NA BT0035 topoisomerase IV subunit Achromosome CDS31829 1887 - 0.279809
NA BT0435 DNA gyrase subunit Achromosome CDS453056 2448 - 0.322712
NA BT0438 DNA polymerase III, beta chainchromosome CDS459346 1161 + 0.302326
NA BT0344 DNA helicase IIchromosome CDS353376 2094 - 0.278892
NA BT0437 chromosomal replication initiator protein DnaAchromosome CDS457651 1455 + 0.280412
NA BT0297 Smf proteinchromosome CDS307652 945 - 0.301587
NA BT0827 ATP-dependent protease Lachromosome CDS881643 2487 - 0.279855
NA BT0463A adenine-specific methyltransferasechromosome CDS487726 852 + 0.251174
NA BT0735A ATP-dependent helicase, DinG familychromosome CDS783082 2058 - 0.255102
NA BT0036 DNA gyrase subunit Bchromosome CDS33715 1797 - 0.301057
NA BT0828 DNA topoisomerase Ichromosome CDS884133 2538 - 0.29078
NA BT0710 DNA primasechromosome CDS750900 1776 + 0.286599
NA BT0131 RecA proteinchromosome CDS126763 1092 - 0.342491
NA BT0836 excinuclease ABC subunit Bchromosome CDS900586 1962 + 0.301733
NA BT0023A crossover junction endodeoxyribonuclease RuvCchromosome CDS22836 486 - 0.296296
NA BT0053 uracil-DNA glycosylasechromosome CDS48870 672 + 0.287202
NA BT0749 hypothetical proteinchromosome CDS799487 1662 + 0.303249
NA BT0634 exodeoxyribonuclease V gamma chainchromosome CDS672495 3225 - 0.242171
NA BT0632 exodeoxyribonuclease V alpha chainchromosome CDS667205 1827 - 0.251779
NA BT0455 hypothetical cytosolic proteinchromosome CDS476938 990 + 0.247475
NA BT0254 single-stranded-DNA-specific exonuclease RecJchromosome CDS265843 2115 + 0.252009
NA BT0206 methyltransferasechromosome CDS206667 546 - 0.29304
NA BT0422 DNA-3-methyladenine glycosylase IIchromosome CDS443187 579 - 0.324698
 
Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LBF_2114 ATP-dependent endonucleasechromosome I CDS2267062 1464 + 0.335383
NA LBF_2110 ATP-dependent endonucleasechromosome I CDS2261390 1377 + 0.318083
NA LBF_2015 Hypothetical protein with a MutT/nudix family-like C-terminal domainchromosome I CDS2163480 543 + 0.412523
NA LBF_1236 Conserved hypothetical protein with Smr domainchromosome I CDS1352089 276 + 0.456522
NA LBF_0730 DNA or RNA helicase of superfamily IIchromosome I CDS774152 3141 - 0.351799
NA LBF_0656 DNA topoisomerase (ATP-hydrolyzing), subunit Achromosome I CDS690369 1371 + 0.390226
NA LBF_3173 Hypothetical proteinchromosome I CDS3407071 423 - 0.330969
NA LBF_0987 Endonuclease III related proteinchromosome I CDS1070280 642 + 0.461059
NA LBF_0048 Transposasechromosome I CDS49890 993 - 0.349446
NA LBF_0657 DNA topoisomerase (ATP-hydrolyzing), subunit Bchromosome I CDS691746 2127 + 0.406676
NA LBF_0780 Hypothetical proteinchromosome I CDS828874 297 + 0.417508
NA LBF_1666 DNA helicasechromosome I CDS1795689 1986 + 0.382679
NA LBF_0514 N6-adenine-specific methylasechromosome I CDS534569 615 + 0.38374
NA LBF_2297 conserved hypothetical proteinchromosome I CDS2443029 1680 - 0.390476
NA LBF_1172 Transposasechromosome I CDS1274181 621 + 0.344605
NA LBF_1241 helicase-like ATPasechromosome I CDS1355334 1260 + 0.461111
NA LBF_2982 Transposase, IS30 familychromosome I CDS3212031 993 + 0.35146
NA LBF_4035 DNA-binding protein, IHF-relatedchromosome II CDS35189 306 + 0.392157
NA LBF_1847 Hypothetical proteinchromosome I CDS1999635 774 + 0.423773
NA LBF_2873 Single-strand DNA binding protein familychromosome I CDS3086806 354 - 0.39548
NA LBF_3156 XerD-like Integrase/recombinasechromosome I CDS3391387 660 + 0.418182
NA LBF_3322 DNA/RNA helicase Superfamily IIchromosome I CDS3567728 2847 + 0.361433
NA LBF_4130 HrpA-like helicasechromosome II CDS129745 2466 - 0.380373
NA LBF_0549 Methylated DNA-protein cysteine methyltransferasechromosome I CDS573982 294 - 0.37415
NA LBF_5032 Helicasep74 CDS43227 4944 - 0.408576
NA LBF_0324 DNA mismatch repair protein ATPase componentchromosome I CDS340555 1818 - 0.351485
NA LBF_1326 DNA and RNA helicase subunitchromosome I CDS1441453 1827 - 0.396825
NA LBF_2464 DNA or RNA helicase of superfamily IIchromosome I CDS2639085 1698 - 0.425206
NA LBF_2626 Conserved hypothetical proteinchromosome I CDS2813089 3231 + 0.421541
NA LBF_2247 Exonucleasechromosome I CDS2387990 759 - 0.362319
NA LBF_1619 Endonucleasechromosome I CDS1746910 345 + 0.373913
NA LBF_1739 N6-adenine-specific DNA methylasechromosome I CDS1875558 1077 + 0.400186
NA LBF_0166 NUDIX domain proteinchromosome I CDS170263 627 - 0.432217
NA LBF_1291 DNA methylasechromosome I CDS1404916 1158 + 0.38601
NA LBF_2734 Superfamily II DNA and RNA helicasechromosome I CDS2927765 1416 - 0.410311
NA LBF_2310 DNA helicase-related proteinchromosome I CDS2457204 1284 + 0.367601
NA LBF_1075 HNH nucleasechromosome I CDS1168716 294 - 0.377551
NA LBF_0338 ATP-dependent DNA helicase, recG-relatedchromosome I CDS353503 2061 + 0.388646
NA LBF_2452 Conserved hypothetical proteinchromosome I CDS2624134 1098 - 0.326047
NA LBF_2082 Superfamily II DNA and RNA helicasechromosome I CDS2233540 1590 - 0.433962
NA LBF_4236 Conserved hypothetical proteinchromosome II CDS236875 1230 - 0.356911
NA LBF_2951 Hypothetical proteinchromosome I CDS3176770 816 + 0.447304
ada LBF_4131 Methylated-DNA--[protein]-cysteine S- methyltransferasechromosome II CDS132329 861 + 0.390244
alkB LBF_3071 Alkylated DNA repair proteinchromosome I CDS3302859 609 - 0.385879
dinP LBF_4145 DNA damage-inducible protein DNA polymerasechromosome II CDS146606 1077 - 0.376045
dnaA LBF_0004 Chromosomal replication initiator proteinchromosome I CDS4188 1326 + 0.394419
dnaB LBF_2042 Replicative DNA helicasechromosome I CDS2197086 1344 - 0.438988
dnaC LBF_0260 DNA replication proteinchromosome I CDS268752 864 + 0.425926
dnaE LBF_2837 DNA-directed DNA polymerase, alpha subunitchromosome I CDS3041794 3522 - 0.390119
dnaG LBF_1514 DNA primasechromosome I CDS1637437 1812 + 0.415011
dnaN LBF_0005 DNA-directed DNA polymerase, beta subunitchromosome I CDS5760 1119 + 0.364611
dnaX-1 LBF_0003 DNA polymerase III gamma and tau subunitschromosome I CDS2975 933 + 0.386924
dnaX-2 LBF_3346 DNA polymerase III, gamma and tau subunitschromosome I CDS3588009 1479 + 0.366464
dprA LBF_0667 DNA processing protein Achromosome I CDS703478 927 + 0.413161
dps LBF_2460 DNA-binding ferritin-like proteinchromosome I CDS2635330 471 + 0.420382
gyrA LBF_0009 DNA gyrase subunit Achromosome I CDS10319 2532 + 0.401659
gyrB LBF_0008 DNA gyrase subunit Bchromosome I CDS8380 1920 + 0.405729
lig LBF_0211 DNA ligase (NAD+) (contains BRCT domain type II)chromosome I CDS211325 2016 - 0.402778
mfd LBF_1770 Transcription-repair coupling factorchromosome I CDS1911714 3423 - 0.378907
mutL LBF_2096 DNA mismatch repair enzyme (predicted ATPase)chromosome I CDS2244981 1845 - 0.463415
mutS LBF_0802 DNA mismatch repair ATPasechromosome I CDS851335 2523 - 0.383274
mutY LBF_1233 A/G-specific DNA glycosylasechromosome I CDS1347838 1062 + 0.38983
nudH LBF_3212 NTP pyrophosphohydrolasechromosome I CDS3445536 492 + 0.373984
phrB LBF_2340 Deoxyribodipyrimidine photolyasechromosome I CDS2487944 1572 + 0.375954
polA LBF_0651 DNA-directed DNA polymerasechromosome I CDS683237 2829 - 0.376458
polB LBF_2104 DNA-directed DNA polymerasechromosome I CDS2254410 2664 + 0.353979
priA LBF_1606 Primosomal protein N'chromosome I CDS1737111 1953 + 0.409626
recA LBF_2374 RecA recombinasechromosome I CDS2527827 1164 + 0.454467
recB LBF_5019 Exodeoxyribonuclease V, beta subunitp74 CDS18545 3630 - 0.371625
recC LBF_5020 Exodeoxyribonuclease V, gamma subunitp74 CDS22171 3300 - 0.356667
recD LBF_5018 Exodeoxyribonuclease V, alpha subunitp74 CDS16746 1803 - 0.374931
recF LBF_0006 Recombinational DNA repair ATPasechromosome I CDS6878 1104 + 0.356884
recJ LBF_1255 Single-stranded DNA-specific exonucleasechromosome I CDS1368969 1989 - 0.409251
recN LBF_1580 DNA repair proteinchromosome I CDS1709041 1710 + 0.438012
recO LBF_2037 Recombinational DNA repair proteinchromosome I CDS2190685 750 - 0.392
recQ-1 LBF_0300 DNA helicase, Superfamily IIchromosome I CDS312534 1857 - 0.430802
recQ-2 LBF_2428 ATP-dependent DNA helicasechromosome I CDS2594081 1446 - 0.377593
recR LBF_3348 Recombinational DNA repair proteinchromosome I CDS3589851 609 + 0.377668
rnhA LBF_2748 Ribonuclease HIchromosome I CDS2946875 414 + 0.374396
rnhB LBF_1615 Ribonuclease Hchromosome I CDS1743867 741 + 0.441296
ruvA LBF_1447 Holliday junction specific DNA binding proteinchromosome I CDS1566535 600 - 0.391667
ruvB LBF_0505 Holliday junction DNA helicasechromosome I CDS528513 1026 + 0.489279
ruvC LBF_3203 Crossover junction endoribonucleasechromosome I CDS3439967 477 + 0.484277
sbcD LBF_2807 DNA repair exonucleasechromosome I CDS3009746 1092 - 0.391941
splB LBF_0608 DNA repair photolyasechromosome I CDS644032 999 - 0.357357
srmB LBF_4201 ATP-dependent RNA helicase (superfamily II)chromosome II CDS209180 1590 + 0.438365
ssb LBF_2045 Single-stranded DNA-binding proteinchromosome I CDS2199263 444 - 0.439189
tatD LBF_3353 Mg-dependent DNasechromosome I CDS3595824 810 - 0.375309
topA LBF_1122 DNA topoisomerasechromosome I CDS1215499 1878 + 0.355165
ung LBF_0791 Uracil DNA glycosylasechromosome I CDS840274 657 - 0.374429
uvrA LBF_1784 Excinuclease ABC, subunit Achromosome I CDS1931289 2865 - 0.431414
uvrB LBF_0814 Helicase subunit of the DNA excision repair complexchromosome I CDS862948 1995 + 0.390476
uvrC LBF_2022 Excinuclease ABC, subunit Cchromosome I CDS2173439 1845 - 0.404336
uvrD-1 LBF_1584 ATP-dependent DNA helicasechromosome I CDS1714762 2184 + 0.36859
uvrD-2 LBF_1683 ATP-dependent DNA helicasechromosome I CDS1816196 1995 + 0.368421
uvrD-3 LBF_2013 DNA/RNA helicase UvrDchromosome I CDS2160667 2016 - 0.441964
xerC LBF_2373 Tyrosine site-specific recombinase XerCchromosome I CDS2526594 936 - 0.382479
xerC-1 LBF_0454 Tyrosine site-specific recombinase XerCchromosome I CDS471278 1287 - 0.362859
xerD LBF_2287 Site-specific recombinase XerDchromosome I CDS2432035 909 - 0.382838
xerD-1 LBF_1161 Site-specific recombinase XerDchromosome I CDS1262829 897 - 0.329989
xseA LBF_1805 Exodeoxyribonuclease VII, large subunitchromosome I CDS1956029 1296 + 0.415895
xseB LBF_1806 Exodeoxyribonuclease VII, small subunitchromosome I CDS1957314 276 + 0.358696
xthA LBF_1776 Exodeoxyribonuclease IIIchromosome I CDS1923508 771 + 0.411154
 
Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LEPBI_I0334 Putative DNA mismatch repair protein; putative membrane proteinchromosome I CDS334985 1542 - 0.353437
NA LEPBI_I3091 Transposase, IS30 familychromosome I CDS3203654 993 + 0.35146
NA LEPBI_I2544 Putative DNA repair helicasechromosome I CDS2632227 1698 - 0.425206
NA LEPBI_I1379 Putative helicasechromosome I CDS1436065 1782 - 0.398429
NA LEPBI_I2365 Conserved hypothetical protein; putative signal peptidechromosome I CDS2436170 1680 - 0.390476
NA LEPBI_I2540 DNA-binding stress protein, Dps familychromosome I CDS2628472 471 + 0.420382
NA LEPBI_I1792 Conserved hypothetical proteinchromosome I CDS1870170 1077 + 0.400186
NA LEPBI_I0753 Putative helicasechromosome I CDS768582 3141 - 0.351799
NA LEPBI_p0033 Putative protein with DEAD/DEAH box helicase and with type III restriction enzyme motifp74 CDS43454 4944 - 0.408576
NA LEPBI_I1669 Conserved hypothetical proteinchromosome I CDS1741523 345 + 0.373913
NA LEPBI_I1217 Putative transposase B, catalytic regionchromosome I CDS1268793 621 + 0.344605
NA LEPBI_I1116 Putative HNH endonucleasechromosome I CDS1163328 294 - 0.377551
NA LEPBI_II0248 Hypothetical proteinchromosome II CDS236564 1230 - 0.356911
NA LEPBI_I3182 Putative DNA repair system specific for alkylated DNAchromosome I CDS3294482 609 - 0.385879
NA LEPBI_I1344 Putative methyltransferase DNA modification enzymechromosome I CDS1399528 1158 + 0.38601
NA LEPBI_I3318 Putative crossover junction endodeoxyribonuclease RuvC (Holliday junction nuclease ruvC)chromosome I CDS3431590 477 + 0.484277
NA LEPBI_I2161 Putative DNA polymerasechromosome I CDS2249020 2664 + 0.353979
NA LEPBI_I0533 Putative methyltransferasechromosome I CDS528999 615 + 0.38374
NA LEPBI_I0568 Putative methylated DNA-protein cysteine methyltransferase, C-terminal domainchromosome I CDS568412 294 - 0.37415
NA LEPBI_I2170 Putative nucleoside triphosphate hydrolasechromosome I CDS2256000 1377 + 0.318083
NA LEPBI_I3269 Putative integrasechromosome I CDS3383010 660 + 0.418182
NA LEPBI_I2396 Conserved hypothetical proteinchromosome I CDS2467584 513 - 0.438596
NA LEPBI_I0171 Putative hydrolasechromosome I CDS166221 627 - 0.432217
NA LEPBI_I1295 Putative ATPase involved in DNA replicationchromosome I CDS1349946 1260 + 0.461111
NA LEPBI_I1719 Putative ATP-dependent helicasechromosome I CDS1790301 1986 + 0.382679
NA LEPBI_I2275 Hypothetical proteinchromosome I CDS2343206 258 + 0.317829
NA LEPBI_I3287 Conserved hypothetical proteinchromosome I CDS3398694 423 - 0.330969
NA LEPBI_I0471 Putative integrase/recombinasechromosome I CDS465708 1287 - 0.362859
NA LEPBI_I2847 Putative ribonuclease Hchromosome I CDS2938489 414 + 0.374396
NA LEPBI_I3468 Putative hydrolasechromosome I CDS3587477 819 - 0.373626
NA LEPBI_I0809 Conserved hypothetical proteinchromosome I CDS823171 297 + 0.417508
NA LEPBI_I1287 Putative A/G-specific DNA glycosylasechromosome I CDS1342450 1062 + 0.38983
NA LEPBI_I3056 Hypothetical protein; putative signal peptidechromosome I CDS3168393 816 + 0.447304
NA LEPBI_I1212 Hypothetical proteinchromosome I CDS1264442 141 - 0.397163
NA LEPBI_I2175 Putative ATPasechromosome I CDS2261672 1464 + 0.335383
NA LEPBI_I2906 Conserved hypothetical proteinchromosome I CDS3001360 1092 - 0.391941
NA LEPBI_I1665 Putative ribonuclease Hchromosome I CDS1738756 465 + 0.43871
NA LEPBI_II0036 Putative DNA-binding protein (HU-like protein)chromosome II CDS35218 306 + 0.392157
NA LEPBI_I2136 ATP-dependent RNA helicasechromosome I CDS2228150 1590 - 0.433962
NA LEPBI_I2068 Conserved hypothetical proteinchromosome I CDS2158091 543 + 0.412523
NA LEPBI_I2709 Conserved hypothetical proteinchromosome I CDS2804703 3231 + 0.421541
NA LEPBI_I1205 Putative integrase/recombinasechromosome I CDS1257441 897 - 0.329989
NA LEPBI_II0133 Putative helicase, ATP-dependentchromosome II CDS129774 2466 - 0.380373
NA LEPBI_I2313 Conserved hypothetical proteinchromosome I CDS2382637 675 - 0.367407
NA LEPBI_I1290 Putative DNA mismatch repair proteinchromosome I CDS1346701 276 + 0.456522
NA LEPBI_I0047 Transposase, IS30 familychromosome I CDS45843 993 - 0.349446
NA LEPBI_I0633 Putative DNA repair photolyasechromosome I CDS638462 999 - 0.357357
NA LEPBI_I1630 Putative DNA repair protein RecNchromosome I CDS1703654 1710 + 0.438012
NA LEPBI_I0690 Putative DNA processing chain A DprA, SMF familychromosome I CDS697908 927 + 0.413161
ada LEPBI_II0134 Bifunctional protein: transcriptional regulator of DNA repair/O6-methylguanine-DNA methyltransferasechromosome II CDS132358 861 + 0.390244
deaD LEPBI_II0208 ATP-dependent RNA helicase, DEAD-box family (DeaD)chromosome II CDS209193 1605 + 0.437383
dinP LEPBI_II0150 DNA polymerase IV, devoid of proofreading, damage-inducible protein Pchromosome II CDS146635 1077 - 0.376045
dnaA LEPBI_I0001 Chromosomal replication initiator protein DnaAchromosome I CDS141 1326 + 0.394419
dnaB LEPBI_I2096 Replicative DNA helicasechromosome I CDS2191697 1344 - 0.438988
dnaC LEPBI_I0269 DNA replication protein DnaCchromosome I CDS263176 870 + 0.426437
dnaE LEPBI_I2936 DNA polymerase III alpha subunitchromosome I CDS3033408 3522 - 0.390119
dnaG LEPBI_I1566 DNA primasechromosome I CDS1632050 1812 + 0.415011
dnaN LEPBI_I0002 DNA polymerase III, beta chainchromosome I CDS1713 1119 + 0.364611
dnaX1 LEPBI_I3461 DNA polymerase III gamma subunitchromosome I CDS3579644 1494 + 0.366801
dnaX2 LEPBI_I3479 DNA polymerase III subunit gamma/tauchromosome I CDS3598605 933 + 0.386924
endA LEPBI_I1902 Endonuclease I; putative signal peptidechromosome I CDS1994246 774 + 0.423773
exoA LEPBI_I1829 Exodeoxyribonucleasechromosome I CDS1918120 771 + 0.411154
gyrA1 LEPBI_I0006 DNA gyrase subunit Achromosome I CDS6272 2532 + 0.401659
gyrA2 LEPBI_I0679 DNA gyrase/topoisomerase, type IV, subunit Achromosome I CDS684784 1386 + 0.391053
gyrB1 LEPBI_I0005 DNA gyrase subunit Bchromosome I CDS4333 1920 + 0.405729
gyrB2 LEPBI_I0680 DNA gyrase/topoisomerase, type IIa, subunit Bchromosome I CDS686176 2127 + 0.406676
hepA LEPBI_I3440 ATP-dependent RNA helicasechromosome I CDS3559378 2847 + 0.361433
ligA LEPBI_I0217 DNA ligase (Polydeoxyribonucleotide synthase [NAD+])chromosome I CDS207283 2016 - 0.402778
mfd LEPBI_I1823 Transcription-repair coupling factor (TRCF; ATP-dependent helicase Mfd)chromosome I CDS1906326 3423 - 0.378907
mutL LEPBI_I2151 DNA mismatch repair protein MutLchromosome I CDS2239591 1845 - 0.463415
mutS LEPBI_I0833 DNA mismatch repair protein MutSchromosome I CDS845632 2502 - 0.382894
nth LEPBI_I1021 Endonuclease III (DNA-(apurinic or apyrimidinic site) lyase)chromosome I CDS1064891 642 + 0.461059
nudH LEPBI_I3326 (Di)nucleoside polyphosphate hydrolase, Nudix hydrolase family (Invasion protein A)chromosome I CDS3437132 519 + 0.373796
pcrA1 LEPBI_I1634 ATP-dependent DNA helicase PcrAchromosome I CDS1709375 2184 + 0.36859
pcrA2 LEPBI_I2378 ATP-dependent DNA helicase PcrAchromosome I CDS2450345 1284 + 0.367601
pcrA3 LEPBI_I1736 ATP-dependent DNA helicase PcrAchromosome I CDS1810808 1995 + 0.368421
pcrA4 LEPBI_I2066 ATP-dependent DNA helicase PcrAchromosome I CDS2155278 2037 - 0.442808
phr LEPBI_I2409 Deoxyribodipyrimidine photolyase (DNA photolyase; Photoreactivating enzyme)chromosome I CDS2481168 1491 + 0.373575
polA LEPBI_I0674 DNA polymerase I (POL I)chromosome I CDS677667 2829 - 0.376458
priA LEPBI_I1656 Primosomal protein N' (Replication factor Y)chromosome I CDS1731724 1953 + 0.409626
recA LEPBI_I2446 Protein RecA (Recombinase A)chromosome I CDS2520970 1164 + 0.454467
recB LEPBI_p0020 Exodeoxyribonuclease V beta chain, UvrD subfamilyp74 CDS18773 3630 - 0.371625
recC LEPBI_p0021 Exodeoxyribonuclease V gamma chainp74 CDS22399 3204 - 0.356429
recD LEPBI_p0019 ATP-dependent exoDNAse (exonuclease V), alpha subunit, helicase superfamily I memberp74 CDS16974 1803 - 0.374931
recF LEPBI_I0003 DNA replication and repair protein RecFchromosome I CDS2831 1104 + 0.356884
recG LEPBI_I0349 ATP-dependent DNA helicase RecGchromosome I CDS347933 2061 + 0.388646
recJ LEPBI_I1309 Single-stranded-DNA-specific exonuclease RecJchromosome I CDS1363581 1989 - 0.409251
recO LEPBI_I2091 DNA repair protein RecO (Recombination protein O)chromosome I CDS2185296 750 - 0.392
recQ1 LEPBI_I0309 ATP-dependent DNA helicase RecQchromosome I CDS306964 1857 - 0.430802
recQ2 LEPBI_I2503 ATP-dependent DNA helicase RecQchromosome I CDS2587224 1446 - 0.377593
recR LEPBI_I3463 Recombination protein RecRchromosome I CDS3581501 609 + 0.377668
rhlE LEPBI_I2827 ATP-dependent RNA helicase RhlEchromosome I CDS2919379 1416 - 0.410311
ruvA LEPBI_I1501 Holliday junction DNA helicase RuvAchromosome I CDS1561155 600 - 0.391667
ruvB LEPBI_I0524 Holliday junction DNA helicase RuvBchromosome I CDS522943 1026 + 0.489279
ssbA LEPBI_I2099 Single-stranded DNA binding protein (SSB; Helix-destabilizing protein)chromosome I CDS2193874 444 - 0.439189
ssbB LEPBI_I2975 Single-strand binding protein (SSB; Helix-destabilizing protein)chromosome I CDS3078420 354 - 0.39548
topA LEPBI_I1163 DNA topoisomerase Ichromosome I CDS1210111 1878 + 0.355698
ung LEPBI_I0821 Uracil-DNA glycosylase (UDG)chromosome I CDS834571 657 - 0.374429
uvrA LEPBI_I1837 UvrABC system protein A (UvrA protein; Excinuclease ABC subunit A)chromosome I CDS1925901 2865 - 0.431414
uvrB LEPBI_I0845 UvrABC system protein B (UvrB protein; Excinuclease ABC subunit B)chromosome I CDS857245 1995 + 0.390476
uvrC LEPBI_I2076 UvrABC system protein C (UvrC protein; Excinuclease ABC subunit C)chromosome I CDS2168050 1845 - 0.404336
xerC LEPBI_I2445 Tyrosine recombinase XerCchromosome I CDS2519737 936 - 0.382479
xerD LEPBI_I2357 Tyrosine recombinase xerDchromosome I CDS2426704 909 - 0.382838
xseA LEPBI_I1860 Exodeoxyribonuclease VII large subunit (Exonuclease VII large subunit)chromosome I CDS1950641 1296 + 0.415895
xseB LEPBI_I1861 Exodeoxyribonuclease VII small subunit (Exonuclease VII small subunit)chromosome I CDS1951926 276 + 0.358696
 
Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LBJ_0203 Transposase, IS1533chromosome 1 CDS236741 1095 + 0.396347
NA LBJ_0450 Transposase, IS1533chromosome 1 CDS546828 1095 + 0.390868
NA LBJ_1279 Conserved hypothetical protein with Smr domainchromosome 1 CDS1520755 312 + 0.391026
NA LBJ_0446 Transposase, IS1533chromosome 1 CDS541508 1095 - 0.390868
NA LBJ_0085 Transposase, IS1533chromosome 1 CDS99180 1095 + 0.394521
NA LBJ_2576 Superfamily II DNA and RNA helicasechromosome 1 CDS3083440 1650 + 0.424848
NA LBJ_1571 Transposase, IS1533chromosome 1 CDS1847038 1095 + 0.389954
NA LBJ_2543 Transposase, IS1533chromosome 1 CDS3043383 1095 + 0.390868
NA LBJ_1790 DNA methylasechromosome 1 CDS2110521 1152 - 0.404514
NA LBJ_3007 Transposase, IS1533chromosome 1 CDS3564249 1095 + 0.391781
NA LBJ_2738 Transposase, IS1533chromosome 1 CDS3249357 1095 + 0.391781
NA LBJ_1613 DNA helicasechromosome 1 CDS1899823 1977 + 0.445119
NA LBJ_1910 DNA and RNA helicase subunitchromosome 1 CDS2254065 1914 - 0.440439
NA LBJ_2940 Transposase, IS1533chromosome 1 CDS3485896 1098 + 0.392532
NA LBJ_1427 Endonucleasechromosome 1 CDS1692292 351 - 0.327635
NA LBJ_0302 Restriction endonuclease, type Ichromosome 1 CDS371109 3327 - 0.412384
NA LBJ_1377 Transposase, IS1533chromosome 1 CDS1636469 1095 + 0.389041
NA LBJ_0730 Transposase, IS1533chromosome 1 CDS874502 1095 + 0.393607
NA LBJ_0222 Transposase, IS1533chromosome 1 CDS255832 1095 - 0.391781
NA LBJ_2869 Transposase, IS1533chromosome 1 CDS3399570 1095 - 0.392694
NA LBJ_0151 Transposase, ISLbp1chromosome 1 CDS183207 1257 - 0.362769
NA LBJ_0077 Transposase, ISLbp1chromosome 1 CDS90928 1257 - 0.362769
NA LBJ_0112 Transposase, IS1533chromosome 1 CDS132328 1095 - 0.389954
NA LBJ_0306 Transposase, IS1533chromosome 1 CDS379172 1095 - 0.389954
NA LBJ_2861 Transposase, ISLbp1chromosome 1 CDS3389265 1257 - 0.363564
NA LBJ_2237 Transposase, IS1533chromosome 1 CDS2661402 1095 + 0.392694
NA LBJ_2712 Uracil-DNA glycosylasechromosome 1 CDS3220204 609 - 0.474548
NA LBJ_1856 Endonuclease III related proteinchromosome 1 CDS2198714 699 - 0.403433
NA LBJ_0995 Transposase, IS1533chromosome 1 CDS1191042 1095 - 0.389954
NA LBJ_2221 Holliday junction resolvase helicase subunit-like ATPasechromosome 1 CDS2641204 1272 - 0.462264
NA LBJ_2034 Transposase, IS1533chromosome 1 CDS2397673 1095 - 0.392694
NA LBJ_0388 Transposase, IS1533chromosome 1 CDS474534 1095 + 0.393607
NA LBJ_2546 Transposase, IS1533chromosome 1 CDS3045906 1095 - 0.390868
NA LBJ_0554 Transposase, ISLbp1chromosome 1 CDS667908 1272 - 0.360849
NA LBJ_2361 Transposase, IS1533chromosome 1 CDS2824662 1095 + 0.390868
NA LBJ_2509 Transposase, IS1533chromosome 1 CDS2997312 1095 + 0.391781
NA LBJ_2624 Transposase, IS1533chromosome 1 CDS3136865 1095 - 0.392694
NA LBJ_2950 Transposase, IS1533chromosome 1 CDS3501672 1095 - 0.389954
NA LBJ_0607 Transposase, IS1533chromosome 1 CDS733601 1095 + 0.390868
NA LBJ_1840 Transposase, IS1533chromosome 1 CDS2178651 1095 + 0.390868
NA LBJ_2611 Transposase, IS1533chromosome 1 CDS3122128 1095 - 0.391781
NA LBJ_2240 Transposase, IS1533chromosome 1 CDS2663928 1095 - 0.393607
NA LBJ_0400 ATP-dependent DNA helicase, recG-relatedchromosome 1 CDS489316 2175 + 0.429885
NA LBJ_2579 Transposase, IS1533chromosome 1 CDS3087140 1095 + 0.389954
NA LBJ_1460 Conserved hypothetical proteinchromosome 1 CDS1720401 3420 - 0.421345
NA LBJ_2324 Transposase, IS1533chromosome 1 CDS2777333 1095 + 0.389954
NA LBJ_0375 Transposase, IS1533chromosome 1 CDS458973 1095 + 0.393607
NA LBJ_1980 DNA methylasechromosome 1 CDS2328372 1083 - 0.417359
NA LBJ_0097 Hypothetical proteinchromosome 1 CDS115746 435 - 0.416092
NA LBJ_0233 DNA/RNA helicase Superfamily IIchromosome 1 CDS271379 2856 + 0.398109
NA LBJ_2628 Exonucleasechromosome 1 CDS3141972 771 - 0.360571
NA LBJ_0651 HNH nucleasechromosome 1 CDS784322 294 + 0.414966
NA LBJ_4103 Transposase, IS1533chromosome 2 CDS119093 1095 - 0.389954
NA LBJ_1937 Site-specific DNA-methyltransferase (adenine- specific), damchromosome 1 CDS2280312 864 + 0.37037
NA LBJ_0550 Transposase, ISLbp1chromosome 1 CDS662667 1272 + 0.360849
NA LBJ_2220 Transposase, IS1533chromosome 1 CDS2639415 1095 - 0.388128
NA LBJ_2088 Transposase, IS1533chromosome 1 CDS2466725 1095 - 0.393607
NA LBJ_2699 Transposase, IS1533chromosome 1 CDS3205651 1095 - 0.389041
NA LBJ_1731 Transposase, IS1533chromosome 1 CDS2043538 1095 - 0.391781
NA LBJ_0489 Methylasechromosome 1 CDS595570 1638 + 0.391331
NA LBJ_2692 Transposase, unnamed1chromosome 1 CDS3198358 1032 + 0.366279
NA LBJ_2051 Transposase, IS1533chromosome 1 CDS2415311 1095 - 0.392694
NA LBJ_1722 Transposase, IS1533chromosome 1 CDS2029641 1095 - 0.394521
NA LBJ_1253 Transposase, ISLbp1chromosome 1 CDS1488578 1257 - 0.361177
NA LBJ_1049 Transposase, IS1533chromosome 1 CDS1259385 1095 - 0.391781
NA LBJ_2592 Transposase, IS1533chromosome 1 CDS3100451 1095 - 0.389954
NA LBJ_2995 Transposase, IS1533chromosome 1 CDS3552322 1095 - 0.389954
NA LBJ_0883 Transposase, IS1533chromosome 1 CDS1071271 1095 + 0.391781
NA LBJ_2403 Transposase, IS1533chromosome 1 CDS2872295 1095 - 0.390868
NA LBJ_2565 Transposase, IS1533chromosome 1 CDS3070118 1095 + 0.391781
NA LBJ_0919 Transposase, IS1533chromosome 1 CDS1105289 1095 - 0.393607
NA LBJ_2195 Transposase, IS1533chromosome 1 CDS2610857 1095 - 0.392694
NA LBJ_2248 Transposase, ISLbp1chromosome 1 CDS2673122 1257 + 0.361177
NA LBJ_1768 Transposase, IS1533chromosome 1 CDS2082838 1095 + 0.394521
NA LBJ_0621 Transposase, IS1533chromosome 1 CDS752174 1095 - 0.389954
NA LBJ_0734 Transposase, IS1533chromosome 1 CDS879195 1095 - 0.389954
NA LBJ_4141 Transposase, IS1533chromosome 2 CDS162855 1095 + 0.391781
NA LBJ_2818 DNA topoisomerase (ATP-hydrolyzing), subunit Bchromosome 1 CDS3336784 2136 + 0.423689
NA LBJ_4071 Transposase, IS1533chromosome 2 CDS79388 1095 + 0.392694
NA LBJ_0115 Methylated DNA-protein cysteine methyltransferasechromosome 1 CDS136405 408 - 0.433824
NA LBJ_1806 Transposase, ISLbp1chromosome 1 CDS2130375 1257 + 0.361177
NA LBJ_0344 Hypothetical proteinchromosome 1 CDS423959 921 - 0.436482
NA LBJ_1383 Transposase, IS1533chromosome 1 CDS1643433 1095 - 0.389041
NA LBJ_1018 N6-adenine-specific DNA methylasechromosome 1 CDS1222638 1245 - 0.414458
NA LBJ_0110 Hypothetical proteinchromosome 1 CDS129112 687 - 0.369723
NA LBJ_0738 Transposase, IS1533chromosome 1 CDS886479 1095 - 0.391781
NA LBJ_1725 Transposase, ISLbp1chromosome 1 CDS2032333 1257 - 0.360382
NA LBJ_2245 Leucine-rich repeat proteinchromosome 1 CDS2670492 528 - 0.382576
NA LBJ_1029 Conserved hypothetical proteinchromosome 1 CDS1236564 1215 + 0.414815
NA LBJ_0364 Transposase, IS1533chromosome 1 CDS446670 1095 - 0.391781
NA LBJ_0239 Hypothetical proteinchromosome 1 CDS281703 795 + 0.379874
NA LBJ_0078 Transposase, IS1533chromosome 1 CDS92986 1095 + 0.389954
NA LBJ_1804 Transposase, IS1533chromosome 1 CDS2127670 1095 - 0.389954
NA LBJ_2696 Transposase, IS1477-likechromosome 1 CDS3201971 999 + 0.392392
NA LBJ_2817 DNA topoisomerase (ATP-hydrolyzing), subunit Achromosome 1 CDS3335399 1389 + 0.408927
NA LBJ_0852 Transposase, IS1533chromosome 1 CDS1033722 1095 - 0.393607
NA LBJ_1979 Transposase, IS1533chromosome 1 CDS2326260 1095 - 0.392694
NA LBJ_0863 Transposase, IS1533chromosome 1 CDS1043200 1095 - 0.393607
NA LBJ_0124 Transposase, IS1533chromosome 1 CDS149494 1095 + 0.389954
NA LBJ_2570 Transposase, ISLbp1chromosome 1 CDS3077101 1257 - 0.360382
NA LBJ_3013 Transposase, IS1533chromosome 1 CDS3569531 1095 + 0.392694
NA LBJ_1473 Transposase, IS1533chromosome 1 CDS1736074 1095 + 0.390868
NA LBJ_2664 Transposase, IS1533chromosome 1 CDS3166160 1095 - 0.390868
NA LBJ_1514 Transposase, IS1533chromosome 1 CDS1783201 1095 - 0.391781
NA LBJ_1576 Transposase, IS1533chromosome 1 CDS1852992 1095 - 0.390868
NA LBJ_0576 Transposase, IS1533chromosome 1 CDS693969 1095 + 0.391781
NA LBJ_1692 Transposase, IS1533chromosome 1 CDS1996289 1095 - 0.392694
NA LBJ_0799 Transposase, IS1477-likechromosome 1 CDS961984 999 + 0.394394
NA LBJ_4036 Transposase, ISLbp1chromosome 2 CDS37857 1257 + 0.361177
NA LBJ_2117 Transposase, IS1533chromosome 1 CDS2502959 1095 + 0.392694
NA LBJ_2682 Transposase, IS1533chromosome 1 CDS3187644 1095 + 0.390868
NA LBJ_0771 N6-adenine-specific methylasechromosome 1 CDS927183 645 + 0.407752
NA LBJ_0879 Transposase, IS1533chromosome 1 CDS1064520 1095 + 0.392694
NA LBJ_2257 Transposase, IS1533chromosome 1 CDS2683563 1095 + 0.394521
NA LBJ_0876 Transposase, ISLbp1chromosome 1 CDS1060538 1257 + 0.360382
NA LBJ_2138 Transposase, IS1477-likechromosome 1 CDS2531556 999 + 0.399399
NA LBJ_1883 DNA or RNA helicase of superfamily IIchromosome 1 CDS2227010 1710 - 0.432164
NA LBJ_0017 Transposase, IS1533chromosome 1 CDS20650 1095 - 0.389041
NA LBJ_2911 DNA mismatch repair protein ATPase componentchromosome 1 CDS3449101 1827 - 0.367269
NA LBJ_0631 Transposase, ISLbp1chromosome 1 CDS762508 1257 - 0.357995
NA LBJ_0751 Hypothetical proteinchromosome 1 CDS911979 768 + 0.410156
NA LBJ_0106 Conserved hypothetical proteinchromosome 1 CDS123495 1818 + 0.371837
NA LBJ_2830 Conserved hypothetical proteinchromosome 1 CDS3349760 1503 - 0.407186
NA LBJ_1986 Transposase, IS1533chromosome 1 CDS2334530 1095 - 0.390868
NA LBJ_2729 Transposase, IS1533chromosome 1 CDS3238499 1095 + 0.391781
NA LBJ_2623 Transposase, IS1533chromosome 1 CDS3134569 1095 + 0.391781
NA LBJ_2308 Hypothetical proteinchromosome 1 CDS2757000 579 + 0.435233
NA LBJ_1061 Transposase, ISLbp1chromosome 1 CDS1275026 1257 + 0.359586
NA LBJ_0192 NUDIX domain proteinchromosome 1 CDS226642 672 - 0.395833
NA LBJ_1050 Transposase, ISLbp1chromosome 1 CDS1260686 807 - 0.35316
NA LBJ_0226 Transposase, IS1533chromosome 1 CDS261580 1095 + 0.393607
NA LBJ_2425 Transposase, IS1533chromosome 1 CDS2902490 1095 + 0.392694
NA LBJ_0428 Transposase, IS1533chromosome 1 CDS516056 1095 - 0.390868
NA LBJ_0667 XerD-like Integrase/recombinasechromosome 1 CDS801689 579 + 0.390328
NA LBJ_1569 Transposase, ISLbp1chromosome 1 CDS1843156 1257 - 0.361177
NA LBJ_2690 Transposase, IS1533chromosome 1 CDS3195862 1095 - 0.389954
NA LBJ_2217 Transposase, IS1533chromosome 1 CDS2635560 1095 + 0.388128
NA LBJ_1341 Transposase, IS1533chromosome 1 CDS1587531 1095 - 0.391781
ada LBJ_2922 Methylated-DNA--[protein]-cysteine S- methyltransferasechromosome 1 CDS3465827 849 - 0.396938
alkA LBJ_0662 DNA-3-methyladenine glycosylase IIchromosome 1 CDS796341 687 - 0.398836
dnaA LBJ_0004 Chromosomal replication initiator proteinchromosome 1 CDS4254 1314 + 0.35997
dnaB LBJ_1197 Replicative DNA helicasechromosome 1 CDS1427378 1329 + 0.463506
dnaC LBJ_0345 DNA replication proteinchromosome 1 CDS425184 858 + 0.439394
dnaE LBJ_2783 DNA-directed DNA polymerase, alpha subunitchromosome 1 CDS3297464 3444 - 0.419861
dnaG LBJ_1375 DNA primasechromosome 1 CDS1632337 1797 + 0.395103
dnaN LBJ_0005 DNA-directed DNA polymerase, beta subunitchromosome 1 CDS6679 1122 + 0.368984
dnaX-1 LBJ_0003 DNA polymerase III gamma and tau subunitschromosome 1 CDS2979 939 + 0.379127
dnaX-2 LBJ_3001 DNA polymerase III, gamma and tau subunitschromosome 1 CDS3557532 1464 + 0.382514
dprA LBJ_0330 DNA processing protein Achromosome 1 CDS409988 984 + 0.402439
dps LBJ_0464 DNA-binding ferritin-like proteinchromosome 1 CDS567916 483 + 0.445135
gyrA LBJ_0009 DNA gyrase subunit Achromosome 1 CDS11368 2499 + 0.401761
gyrB LBJ_0008 DNA gyrase subunit Bchromosome 1 CDS9424 1926 + 0.396158
hsdM LBJ_0305 Type I restriction-modification system, methyltransferase subunitchromosome 1 CDS376817 1542 - 0.44358
lig LBJ_0176 DNA ligase (NAD+)chromosome 1 CDS209713 2046 + 0.402248
mcrA LBJ_1335 Restriction endonuclease, HNH familychromosome 1 CDS1579704 555 - 0.423423
mfd LBJ_1666 Transcription-repair coupling factorchromosome 1 CDS1963421 3531 - 0.433588
mutL LBJ_2225 DNA mismatch repair enzymechromosome 1 CDS2644165 1791 - 0.447236
mutS LBJ_1867 DNA mismatch repair ATPasechromosome 1 CDS2208939 2547 + 0.40636
mutY LBJ_1296 A/G-specific DNA glycosylasechromosome 1 CDS1536566 1119 + 0.403038
nudH LBJ_0418 NTP pyrophosphohydrolasechromosome 1 CDS508505 489 - 0.398773
polA LBJ_2564 DNA-directed DNA polymerasechromosome 1 CDS3066931 2766 + 0.427332
priA LBJ_1440 Primosomal protein N'chromosome 1 CDS1700713 1944 - 0.431584
radC LBJ_0956 DNA repair proteinchromosome 1 CDS1142732 699 + 0.447783
recA LBJ_1344 RecA recombinasechromosome 1 CDS1591404 1104 - 0.419384
recB LBJ_0684 Exodeoxyribonuclease V, beta chainchromosome 1 CDS820089 3165 - 0.411374
recC LBJ_0685 Exodeoxyribonuclease V, gamma subunitchromosome 1 CDS823250 3396 - 0.419022
recD LBJ_0683 Exodeoxyribonuclease V, alpha subunitchromosome 1 CDS818242 1848 - 0.42316
recF LBJ_0006 Recombinational DNA repair ATPasechromosome 1 CDS7800 1098 + 0.362477
recJ LBJ_1989 Single-stranded DNA-specific exonucleasechromosome 1 CDS2337221 1938 + 0.433437
recN LBJ_1302 DNA repair proteinchromosome 1 CDS1542990 1707 + 0.427651
recQ-1 LBJ_0296 DNA helicase, Superfamily IIchromosome 1 CDS360346 1866 - 0.405681
recQ-2 LBJ_0686 ATP-dependent DNA helicasechromosome 1 CDS826750 1449 + 0.410628
recR LBJ_3003 Recombinational DNA repair proteinchromosome 1 CDS3559340 594 + 0.412458
rnhA LBJ_1538 Ribonuclease HIchromosome 1 CDS1812431 390 - 0.441026
rnhB LBJ_1431 Ribonuclease Hchromosome 1 CDS1695137 672 - 0.401786
ruvA LBJ_1987 Holliday junction specific DNA binding proteinchromosome 1 CDS2336049 639 + 0.380282
ruvB LBJ_0761 Holliday junction DNA helicasechromosome 1 CDS919356 1026 + 0.44152
ruvC LBJ_0544 Crossover junction endoribonucleasechromosome 1 CDS658107 501 + 0.447106
sbcD LBJ_0659 DNA repair exonucleasechromosome 1 CDS792020 1086 - 0.432781
srmB LBJ_0225 ATP-dependent RNA helicase (superfamily II)chromosome 1 CDS259462 1542 - 0.417639
ssb LBJ_1194 Single-stranded DNA-binding proteinchromosome 1 CDS1426130 450 + 0.444444
tatD LBJ_0025 Mg-dependent DNasechromosome 1 CDS31339 810 - 0.381481
topA LBJ_1228 DNA topoisomerasechromosome 1 CDS1459608 1842 + 0.408252
ung LBJ_0598 Uracil-DNA glycosylasechromosome 1 CDS721922 618 - 0.412621
uvrA LBJ_1403 Excinuclease ABC, subunit Achromosome 1 CDS1667639 2907 + 0.436532
uvrB LBJ_2353 Helicase subunit of the DNA excision repair complexchromosome 1 CDS2813427 2001 + 0.432784
uvrC LBJ_1853 Excinuclease ABC, subunit Cchromosome 1 CDS2195862 1830 - 0.421311
uvrD-1 LBJ_1306 ATP-dependent DNA helicasechromosome 1 CDS1548811 2193 + 0.406749
uvrD-2 LBJ_1356 ATP-dependent DNA helicasechromosome 1 CDS1609223 1998 - 0.3999
uvrD-3 LBJ_2305 DNA/RNA helicase UvrDchromosome 1 CDS2752077 2025 - 0.428642
xerC LBJ_1282 Tyrosine site-specific recombinase XerCchromosome 1 CDS1523202 936 + 0.389957
xerD LBJ_1486 Site-specific recombinase XerDchromosome 1 CDS1748662 897 - 0.38796
xseA LBJ_1274 Exodeoxyribonuclease VII, large subunitchromosome 1 CDS1514946 1269 - 0.439716
xseB LBJ_1273 Exodeoxyribonuclease VII, small subunitchromosome 1 CDS1514653 291 - 0.43299
xthA LBJ_1669 Exodeoxyribonuclease IIIchromosome 1 CDS1969190 765 + 0.428758
 
Leptospira borgpetersenii serovar Hardjo-bovis L550, L550
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LBL_2774 Restriction endonuclease, type Ichromosome 1 CDS3286343 3099 + 0.411423
NA LBL_0448 Transposase, IS1533chromosome 1 CDS506821 1095 + 0.385388
NA LBL_1504 Conserved hypothetical protein with Smr domainchromosome 1 CDS1762478 312 + 0.391026
NA LBL_0241 Conserved hypothetical proteinchromosome 1 CDS289899 1503 + 0.407851
NA LBL_1477 Transposase, ISLbp1chromosome 1 CDS1730364 1257 - 0.361973
NA LBL_0333 Transposase, IS1533chromosome 1 CDS390771 1101 - 0.391462
NA LBL_0547 Transposase, IS1533chromosome 1 CDS602853 1095 - 0.393607
NA LBL_1302 Transposase, ISLbp1chromosome 1 CDS1530632 1257 - 0.358791
NA LBL_0941 ADP-ribose pyrophosphatasechromosome 1 CDS1089627 588 + 0.396259
NA LBL_0444 Exonucleasechromosome 1 CDS502040 771 + 0.360571
NA LBL_1497 Transposase, IS1533chromosome 1 CDS1754735 1095 - 0.392694
NA LBL_0488 Transposase, IS1533chromosome 1 CDS536115 1095 + 0.391781
NA LBL_1016 Transposase, IS1533chromosome 1 CDS1184810 1098 + 0.388889
NA LBL_2340 Transposase, IS1533chromosome 1 CDS2774644 1101 + 0.388737
NA LBL_2770 Transposase, IS1533chromosome 1 CDS3280518 1095 + 0.389954
NA LBL_2530 Transposase, ISLbp1chromosome 1 CDS2998302 1257 - 0.361973
NA LBL_0114 Transposase, IS1533chromosome 1 CDS130026 1092 + 0.39011
NA LBL_1243 Transposase, IS1533chromosome 1 CDS1463790 1095 - 0.391781
NA LBL_0868 Transposase, IS1533chromosome 1 CDS1009508 1095 - 0.393607
NA LBL_1950 Transposase, IS1533chromosome 1 CDS2278176 1101 - 0.390554
NA LBL_2526 Transposase, ISLbp1chromosome 1 CDS2993107 1257 + 0.361973
NA LBL_0123 Transposase, IS1533chromosome 1 CDS143295 1095 - 0.394521
NA LBL_1108 Transposase, ISLbp1chromosome 1 CDS1302898 1257 - 0.359586
NA LBL_0484 Exonucleasechromosome 1 CDS531327 771 + 0.360571
NA LBL_1304 Transposase, IS1533chromosome 1 CDS1533500 1101 + 0.391462
NA LBL_0489 Transposase, IS1533chromosome 1 CDS538411 1095 - 0.390868
NA LBL_0029 Conserved hypothetical proteinchromosome 1 CDS36218 1818 - 0.370737
NA LBL_1566 Transposase, IS1533chromosome 1 CDS1829254 1095 - 0.390868
NA LBL_1084 DNA methylasechromosome 1 CDS1273861 1152 + 0.404514
NA LBL_0390 Transposase, IS1533chromosome 1 CDS456047 1101 - 0.391462
NA LBL_4036 Transposase, ISLbp1chromosome 2 CDS37857 1257 + 0.362769
NA LBL_0859 Transposase, ISLbp1chromosome 1 CDS997632 1218 - 0.36289
NA LBL_2114 Transposase, IS1533chromosome 1 CDS2471729 1095 + 0.389954
NA LBL_1066 DNA methylasechromosome 1 CDS1250984 1083 - 0.416436
NA LBL_0934 Transposase, IS1533chromosome 1 CDS1079495 1095 - 0.389954
NA LBL_1428 Endonuclease III related proteinchromosome 1 CDS1662394 699 + 0.404864
NA LBL_0408 Transposase, IS1533chromosome 1 CDS477534 1095 + 0.385388
NA LBL_2448 Transposase, ISLbp1chromosome 1 CDS2898572 1257 + 0.362769
NA LBL_1435 Transposase, ISLbp6chromosome 1 CDS1672251 654 + 0.382263
NA LBL_1944 Transposase, ISLbp1chromosome 1 CDS2266968 1257 - 0.360382
NA LBL_1347 Site-specific DNA-methyltransferase (adenine- specific), damchromosome 1 CDS1580631 864 - 0.37037
NA LBL_2962 Methylated DNA-protein cysteine methyltransferasechromosome 1 CDS3524435 408 - 0.433824
NA LBL_0875 Transposase, ISLbp1chromosome 1 CDS1020079 1257 - 0.363564
NA LBL_2971 Transposase, IS1533chromosome 1 CDS3537515 1095 + 0.391781
NA LBL_0520 Transposase, IS1533chromosome 1 CDS572524 1095 + 0.392694
NA LBL_2040 Transposase, IS1533chromosome 1 CDS2385922 1101 + 0.388737
NA LBL_0025 Hypothetical proteinchromosome 1 CDS31732 687 + 0.368268
NA LBL_2005 Conserved hypothetical proteinchromosome 1 CDS2340280 1215 - 0.415638
NA LBL_0380 Transposase, unnamed1chromosome 1 CDS445614 1032 - 0.36531
NA LBL_0362 Uracil-DNA glycosylasechromosome 1 CDS424224 609 + 0.474548
NA LBL_0850 Transposase, IS1533chromosome 1 CDS987307 1095 - 0.389954
NA LBL_0501 Transposase, IS1533chromosome 1 CDS550848 1095 + 0.392694
NA LBL_2649 Transposase, IS1533chromosome 1 CDS3145144 1092 + 0.391026
NA LBL_0253 DNA topoisomerase (ATP-hydrolyzing), subunit Bchromosome 1 CDS302315 2136 - 0.423689
NA LBL_0051 Transposase, IS1533chromosome 1 CDS61253 1095 - 0.389954
NA LBL_2210 Transposase, IS1533chromosome 1 CDS2602303 1095 + 0.390868
NA LBL_1941 Transposase, IS1533chromosome 1 CDS2264276 1095 - 0.392694
NA LBL_0784 Transposase, IS1533chromosome 1 CDS893541 1095 - 0.390868
NA LBL_0536 Superfamily II DNA and RNA helicasechromosome 1 CDS588970 1650 - 0.424848
NA LBL_1073 Transposase, IS1533chromosome 1 CDS1257719 1101 + 0.389646
NA LBL_2327 Hypothetical proteinchromosome 1 CDS2749471 768 - 0.410156
NA LBL_4119 Transposase, IS1533chromosome 2 CDS136412 1095 - 0.390868
NA LBL_1794 Transposase, IS1533chromosome 1 CDS2087305 1101 - 0.388737
NA LBL_0569 Transposase, IS1533chromosome 1 CDS629576 1095 - 0.390868
NA LBL_2213 Transposase, IS1533chromosome 1 CDS2606158 1095 - 0.390868
NA LBL_2977 Transposase, IS1533chromosome 1 CDS3542790 1095 + 0.388128
NA LBL_1401 DNA or RNA helicase of superfamily IIchromosome 1 CDS1633087 1710 + 0.431579
NA LBL_2933 Transposase, ISLbp1chromosome 1 CDS3486486 1257 + 0.361973
NA LBL_2504 Transposase, IS1533chromosome 1 CDS2967206 1095 - 0.390868
NA LBL_2134 Transposase, IS1477-likechromosome 1 CDS2500323 999 + 0.397397
NA LBL_2689 Transposase, IS1533chromosome 1 CDS3186640 1095 - 0.391781
NA LBL_1444 Transposase, IS1533chromosome 1 CDS1682042 1101 - 0.388737
NA LBL_1065 Transposase, IS1533chromosome 1 CDS1248866 1101 - 0.389646
NA LBL_2412 XerD-like Integrase/recombinasechromosome 1 CDS2860038 579 - 0.390328
NA LBL_1146 Transposase, IS1533chromosome 1 CDS1355195 1101 + 0.390554
NA LBL_3033 Transposase, IS1533chromosome 1 CDS3607495 1095 + 0.395434
NA LBL_2189 Transposase, IS1533chromosome 1 CDS2577596 1095 - 0.389041
NA LBL_0058 Transposase, IS1533chromosome 1 CDS67438 1095 - 0.389041
NA LBL_0962 TolC-like outer membrane protein fused with an IS1533 transposasechromosome 1 CDS1114419 2430 + 0.402881
NA LBL_0603 Transposase, IS1533chromosome 1 CDS675867 1092 - 0.389194
NA LBL_2307 N6-adenine-specific methylasechromosome 1 CDS2734221 645 - 0.407752
NA LBL_0747 Transposase, IS1533chromosome 1 CDS846221 1095 - 0.392694
NA LBL_0341 Transposase, IS1533chromosome 1 CDS401635 1095 - 0.392694
NA LBL_0017 Transposase, IS1533chromosome 1 CDS20645 1095 - 0.389954
NA LBL_2590 Methylasechromosome 1 CDS3065165 1638 - 0.39072
NA LBL_1154 Transposase, IS1533chromosome 1 CDS1364265 1101 - 0.389646
NA LBL_0376 Transposase, IS1477-likechromosome 1 CDS442034 999 - 0.393393
NA LBL_1697 Transposase, IS1533chromosome 1 CDS1977613 1095 + 0.394521
NA LBL_2444 Single-strand DNA binding protein familychromosome 1 CDS2895142 354 + 0.451977
NA LBL_2677 ATP-dependent DNA helicase, recG-relatedchromosome 1 CDS3170793 2175 - 0.428046
NA LBL_2841 Hypothetical proteinchromosome 1 CDS3388427 795 - 0.379874
NA LBL_0152 DNA mismatch repair protein ATPase componentchromosome 1 CDS179712 1827 + 0.366721
NA LBL_4156 Transposase, IS1533chromosome 2 CDS180113 1095 + 0.391781
NA LBL_4150 Transposase, IS1533chromosome 2 CDS172113 1101 - 0.389646
NA LBL_0138 Transposase, IS1533chromosome 1 CDS159696 1095 - 0.394521
NA LBL_0566 Transposase, IS1533chromosome 1 CDS627065 1095 + 0.391781
NA LBL_4212 Transposase, IS1533chromosome 2 CDS246324 1101 - 0.388737
NA LBL_0705 Transposase, IS1533chromosome 1 CDS798608 1095 + 0.390868
NA LBL_2632 Transposase, IS1533chromosome 1 CDS3119693 1095 + 0.388128
NA LBL_2628 Transposase, IS1533chromosome 1 CDS3114372 1095 - 0.386301
NA LBL_1793 Transposase, ISLbp1chromosome 1 CDS2084699 1257 - 0.359586
NA LBL_0070 Transposase, IS1533chromosome 1 CDS79366 1095 + 0.391781
NA LBL_0799 Hypothetical proteinchromosome 1 CDS914392 579 - 0.435233
NA LBL_1201 Transposase, IS1533chromosome 1 CDS1416010 1095 + 0.389954
NA LBL_0899 Transposase, IS1533chromosome 1 CDS1046362 1095 - 0.390868
NA LBL_1374 DNA and RNA helicase subunitchromosome 1 CDS1605828 1914 + 0.439916
NA LBL_2016 N6-adenine-specific DNA methylasechromosome 1 CDS2354174 1245 + 0.415261
NA LBL_4120 XerD related protein (integrase family)chromosome 2 CDS138643 897 - 0.373467
NA LBL_1831 DNA helicasechromosome 1 CDS2134156 1977 + 0.445625
NA LBL_4071 Transposase, IS1533chromosome 2 CDS79121 1095 + 0.390868
NA LBL_0533 Transposase, IS1533chromosome 1 CDS585828 1095 - 0.389954
NA LBL_2458 Transposase, IS1533chromosome 1 CDS2909069 1095 + 0.391781
NA LBL_1987 Transposase, IS1533chromosome 1 CDS2317587 1095 + 0.390868
NA LBL_2732 Hypothetical proteinchromosome 1 CDS3235915 921 + 0.436482
NA LBL_2428 HNH nucleasechromosome 1 CDS2877723 294 - 0.414966
NA LBL_0038 Hypothetical proteinchromosome 1 CDS45350 435 + 0.416092
NA LBL_2214 Holliday junction resolvase helicase subunit-like ATPasechromosome 1 CDS2607947 1272 - 0.462264
NA LBL_1896 Transposase, IS1533chromosome 1 CDS2210449 1095 + 0.390868
NA LBL_2280 Transposase, IS1477-likechromosome 1 CDS2699089 1005 - 0.397015
NA LBL_0210 Transposase, ISLbp1chromosome 1 CDS250634 1257 + 0.363564
NA LBL_2230 Transposase, IS1533chromosome 1 CDS2628144 1095 + 0.392694
NA LBL_2891 NUDIX domain proteinchromosome 1 CDS3443636 672 + 0.395833
NA LBL_1119 Transposase, ISLbp1chromosome 1 CDS1317234 1257 + 0.359586
NA LBL_2702 Transposase, IS1533chromosome 1 CDS3202190 1101 - 0.385104
NA LBL_2847 DNA/RNA helicase Superfamily IIchromosome 1 CDS3396690 2856 - 0.397759
NA LBL_0542 Transposase, ISLbp1chromosome 1 CDS595702 1257 + 0.361973
NA LBL_0373 Transposase, IS1533chromosome 1 CDS438266 1095 + 0.389954
NA LBL_1651 Endonucleasechromosome 1 CDS1933833 351 - 0.327635
NA LBL_0254 DNA topoisomerase (ATP-hydrolyzing), subunit Achromosome 1 CDS304447 1389 - 0.409647
NA LBL_0999 Transposase, IS1533chromosome 1 CDS1167166 1095 + 0.390868
NA LBL_0865 Transposase, IS1533chromosome 1 CDS1006982 1095 + 0.394521
NA LBL_0202 Transposase, IS1533chromosome 1 CDS240491 1095 + 0.394521
ada LBL_0141 Methylated-DNA--[protein]-cysteine S- methyltransferasechromosome 1 CDS164018 849 + 0.39576
alkA LBL_2417 DNA-3-methyladenine glycosylase IIchromosome 1 CDS2865278 687 + 0.400291
dnaA LBL_0004 Chromosomal replication initiator proteinchromosome 1 CDS4254 1314 + 0.35997
dnaB LBL_1249 Replicative DNA helicasechromosome 1 CDS1469313 1329 + 0.463506
dnaC LBL_2731 DNA replication proteinchromosome 1 CDS3234753 858 - 0.440559
dnaE LBL_0288 DNA-directed DNA polymerase, alpha subunitchromosome 1 CDS340239 3531 + 0.419994
dnaG LBL_1600 DNA primasechromosome 1 CDS1874061 1797 + 0.395659
dnaN LBL_0005 DNA-directed DNA polymerase, beta subunitchromosome 1 CDS6679 1122 + 0.368093
dnaX-1 LBL_0003 DNA polymerase III gamma and tau subunitschromosome 1 CDS2979 939 + 0.375932
dnaX-2 LBL_0064 DNA polymerase III, gamma and tau subunitschromosome 1 CDS72649 1464 + 0.381831
dprA LBL_2746 DNA processing protein Achromosome 1 CDS3249827 984 - 0.403455
dps LBL_2615 DNA-binding ferritin-like proteinchromosome 1 CDS3093974 483 - 0.445135
gyrA LBL_0009 DNA gyrase subunit Achromosome 1 CDS11368 2499 + 0.402161
gyrB LBL_0008 DNA gyrase subunit Bchromosome 1 CDS9424 1926 + 0.397715
hsdM LBL_2771 Type I restriction-modification system, methyltransferase subunitchromosome 1 CDS3282420 1542 + 0.442931
lig LBL_2907 DNA ligase (NAD+) (contains BRCT domain type II)chromosome 1 CDS3459191 2046 - 0.40176
mcrA LBL_1560 Restriction endonuclease, HNH familychromosome 1 CDS1821427 555 - 0.423423
mfd LBL_1885 Transcription-repair coupling factorchromosome 1 CDS2198023 3531 - 0.433588
mutL LBL_2218 DNA mismatch repair enzyme (predicted ATPase)chromosome 1 CDS2610908 1791 - 0.446678
mutS LBL_1417 DNA mismatch repair ATPasechromosome 1 CDS1650321 2547 - 0.405968
mutY LBL_1521 A/G-specific DNA glycosylasechromosome 1 CDS1778289 1119 + 0.403038
nudH LBL_2659 NTP pyrophosphohydrolasechromosome 1 CDS3153290 489 + 0.396728
polA LBL_0548 DNA-directed DNA polymerasechromosome 1 CDS604369 2766 - 0.426609
priA LBL_1664 Primosomal protein N'chromosome 1 CDS1942254 1944 - 0.431584
radC LBL_2077 DNA repair proteinchromosome 1 CDS2434643 699 - 0.449213
recA LBL_1569 RecA recombinasechromosome 1 CDS1833127 1104 - 0.419384
recB LBL_2395 Exodeoxyribonuclease V, beta chainchromosome 1 CDS2838960 3165 + 0.411058
recC LBL_2394 Exodeoxyribonuclease V, gamma subunitchromosome 1 CDS2835568 3396 + 0.419022
recD LBL_2396 Exodeoxyribonuclease V, alpha subunitchromosome 1 CDS2842121 1851 + 0.422474
recF LBL_0006 Recombinational DNA repair ATPasechromosome 1 CDS7800 1098 + 0.362477
recJ LBL_1061 Single-stranded DNA-specific exonucleasechromosome 1 CDS1244428 1938 - 0.432921
recN LBL_1527 DNA repair proteinchromosome 1 CDS1784711 1707 + 0.426479
recQ-1 LBL_2780 DNA helicase, Superfamily IIchromosome 1 CDS3298569 1866 + 0.404609
recQ-2 LBL_2393 ATP-dependent DNA helicasechromosome 1 CDS2834015 1449 - 0.410628
recR LBL_0066 Recombinational DNA repair proteinchromosome 1 CDS74457 594 + 0.412458
rnhA LBL_1762 Ribonuclease HIchromosome 1 CDS2053968 390 - 0.44359
rnhB LBL_1655 Ribonuclease Hchromosome 1 CDS1936678 672 - 0.401786
ruvA LBL_1063 Holliday junction specific DNA binding proteinchromosome 1 CDS1246899 639 - 0.380282
ruvB LBL_2317 Holliday junction DNA helicasechromosome 1 CDS2741667 1026 - 0.440546
ruvC LBL_2536 Crossover junction endoribonucleasechromosome 1 CDS3003632 501 - 0.443114
sbcD LBL_2420 DNA repair exonucleasechromosome 1 CDS2869200 1086 + 0.432781
srmB LBL_2858 ATP-dependent RNA helicase (superfamily II)chromosome 1 CDS3411882 1542 - 0.418288
ssb LBL_1246 Single-stranded DNA-binding proteinchromosome 1 CDS1468065 450 + 0.444444
tatD LBL_2979 Mg-dependent DNasechromosome 1 CDS3545813 810 - 0.381481
topA LBL_1279 DNA topoisomerasechromosome 1 CDS1501459 1842 + 0.408252
ung LBL_2482 Uracil-DNA glycosylasechromosome 1 CDS2939794 618 + 0.412621
uvrA LBL_1629 Excinuclease ABC, subunit Achromosome 1 CDS1909177 2907 + 0.436532
uvrB LBL_0755 Helicase subunit of the DNA excision repair complexchromosome 1 CDS856550 2001 - 0.432284
uvrC LBL_1431 Excinuclease ABC, subunit Cchromosome 1 CDS1664115 1830 + 0.421858
uvrD-1 LBL_1531 ATP-dependent DNA helicasechromosome 1 CDS1790534 2193 + 0.406749
uvrD-2 LBL_1581 ATP-dependent DNA helicasechromosome 1 CDS1850947 1998 - 0.3999
uvrD-3 LBL_0802 DNA/RNA helicase UvrDchromosome 1 CDS917869 2025 + 0.428642
xerC LBL_1507 Tyrosine site-specific recombinase XerCchromosome 1 CDS1764925 936 + 0.389957
xerD LBL_1710 Site-specific recombinase XerDchromosome 1 CDS1990202 897 - 0.386845
xseA LBL_1499 Exodeoxyribonuclease VII, large subunitchromosome 1 CDS1756669 1269 - 0.439716
xseB LBL_1498 Exodeoxyribonuclease VII, small subunitchromosome 1 CDS1756376 291 - 0.43299
xthA LBL_1888 Exodeoxyribonuclease IIIchromosome 1 CDS2203792 765 + 0.428758
 
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LIC12427 conserved hypothetical proteinchromosome I CDS2946281 1233 - 0.36253
NA LIC12189 conserved hypothetical proteinchromosome I CDS2642892 528 - 0.363636
NA LIC11309 conserved hypothetical proteinchromosome I CDS1616487 1251 - 0.365308
NA LIC10548 uracil-DNA glycosylasechromosome I CDS670544 657 - 0.401826
NA LIC13481 conserved hypothetical proteinchromosome I CDS4257126 810 - 0.32963
NA LIC12589 conserved hypothetical proteinchromosome I CDS3136774 579 + 0.367876
NA LIC11724 conserved hypothetical proteinchromosome I CDS2099731 507 + 0.280079
NA LIC10265 transposase, ISlin1chromosome I CDS301964 360 + 0.380556
NA LIC12557 conserved hypothetical proteinchromosome I CDS3098004 768 + 0.352865
NA LIC10907 conserved hypothetical proteinchromosome I CDS1091629 327 + 0.342508
NA LIC10888 transposase, ISlin1chromosome I CDS1072657 630 - 0.344444
NA LIC10781 transposasechromosome I CDS949924 306 - 0.339869
NA LIC10785 transposase, IS1501chromosome I CDS952875 264 - 0.405303
NA LIC13102 uracil DNA glycosylasechromosome I CDS3794701 618 - 0.354369
NA LIC13061 transposase, ISlin1chromosome I CDS3738039 309 + 0.417476
NA LIC11819 conserved hypothetical proteinchromosome I CDS2212588 1905 - 0.361155
NA LIC12689 ATP-dependent DNA helicasechromosome I CDS3263508 1449 + 0.343685
NA LIC10616 DNA processing chain Achromosome I CDS754189 984 + 0.367886
NA LIC13497 DNA polymerase III subunit-related proteinchromosome I CDS4276081 933 + 0.330118
NA LIC13457 conserved hypothetical proteinchromosome I CDS4234880 636 + 0.327044
NA LIC12043 conserved hypothetical proteinchromosome I CDS2463978 366 - 0.308743
NA LIC10251 Rad50-like proteinchromosome I CDS285742 2316 - 0.32513
NA LIC12915 conserved hypothetical proteinchromosome I CDS3541044 429 + 0.32634
NA LIC12046 hypothetical proteinchromosome I CDS2465784 741 - 0.260459
NA LIC10080 conserved hypothetical proteinchromosome I CDS98030 822 - 0.274939
NA LIC12555 conserved hypothetical proteinchromosome I CDS3095230 1035 + 0.332367
NA LIC12056 transposase, IS1500chromosome I CDS2489416 849 - 0.369847
NA LIC13063 transposase, ISlin1chromosome I CDS3738996 360 + 0.375
NA LIC12914 conserved hypothetical proteinchromosome I CDS3539984 921 + 0.396308
NA LIC10540 conserved hypothetical proteinchromosome I CDS659620 321 - 0.305296
NA LIC11473 transposase, ISlin1chromosome I CDS1820719 309 - 0.420712
NA LIC10564 single-strand DNA-binding proteinchromosome I CDS690659 354 + 0.403955
NA LIC10887 transposase, ISlin1chromosome I CDS1072177 450 - 0.382222
NA LIC10743 transposase, ISlin1chromosome I CDS907257 747 - 0.353414
NA LIC13021 conserved hypothetical proteinchromosome I CDS3680746 2574 - 0.386169
NA LIC11173 conserved hypothetical proteinchromosome I CDS1442153 1500 + 0.386667
NA LIC10942 conserved hypothetical proteinchromosome I CDS1134751 855 - 0.4
NA LIC12890 conserved hypothetical proteinchromosome I CDS3491722 510 + 0.376471
NA LIC20098 phage-related integrase/recombinasechromosome II CDS114933 900 - 0.356667
NA LIC13377 transposase, IS1501chromosome I CDS4140791 837 - 0.390681
NA LIC10252 exonucleasechromosome I CDS288059 1086 - 0.368324
NA LIC12616 conserved hypothetical proteinchromosome I CDS3164457 525 - 0.358095
NA LIC10886 transposase, ISlin1chromosome I CDS1071340 381 + 0.380577
NA LIC13114 transposase, ISlin1chromosome I CDS3810555 348 - 0.387931
NA LIC12662 transposase, IS1500chromosome I CDS3223746 300 + 0.386667
NA LIC11245 conserved hypothetical proteinchromosome I CDS1536022 306 + 0.395425
NA LIC11471 transposase, ISlin1chromosome I CDS1819711 360 - 0.375
NA LIC12802 conserved hypothetical proteinchromosome I CDS3408674 567 - 0.345679
NA LIC10784 transposase, IS1501chromosome I CDS952496 339 - 0.389381
NA LIC11381 conserved hypothetical proteinchromosome I CDS1698641 1986 + 0.41289
NA LIC11596 DNA mismatch repair proteinchromosome I CDS1955910 369 + 0.368564
NA LIC10780 transposasechromosome I CDS949354 285 - 0.319298
NA LIC11487 conserved hypothetical proteinchromosome I CDS1835557 552 - 0.29529
NA LIC13166 conserved hypothetical proteinchromosome I CDS3875998 921 + 0.402823
NA LIC10014 conserved hypothetical proteinchromosome I CDS18319 1089 - 0.314968
NA LIC12297 DNA repair proteinchromosome I CDS2771760 699 - 0.414878
NA LIC11639 conserved hypothetical proteinchromosome I CDS2004459 1110 - 0.327027
NA LIC11449 transposase, ISlin1chromosome I CDS1787130 588 - 0.365646
NA LIC11031 transposase, ISlin1chromosome I CDS1271385 396 + 0.429293
NA LIC12737 site-specific modification DNA-methyltransferasechromosome I CDS3333389 1632 - 0.35049
NA LIC13454 conserved hypothetical proteinchromosome I CDS4232730 303 - 0.316832
NA LIC11452 exodeoxyribonucleasechromosome I CDS1789376 765 - 0.398693
NA LIC12222 DNA methyltransferasechromosome I CDS2681540 1095 + 0.360731
NA LIC11074 conserved hypothetical proteinchromosome I CDS1325501 699 + 0.386266
NA LIC10264 transposase, ISlin1chromosome I CDS301371 588 + 0.365646
NA LIC11483 conserved hypothetical proteinchromosome I CDS1830772 1719 - 0.3758
NA LIC13347 DNA gyrase subunit Achromosome I CDS4103363 1389 + 0.37005
NA LIC11658 conserved hypothetical proteinchromosome I CDS2023216 429 + 0.337995
NA LIC10742 transposase, ISlin1chromosome I CDS906892 360 - 0.369444
NA LIC11590 exodeoxyribonuclease small subunitchromosome I CDS1949939 288 - 0.333333
NA LIC11032 transposase, ISlin1chromosome I CDS1271749 915 + 0.370492
NA LIC12781 conserved hypothetical proteinchromosome I CDS3384911 915 - 0.326776
NA LIC12722 transposase, IS1533chromosome I CDS3312795 372 + 0.430108
NA LIC10106 conserved hypothetical proteinchromosome I CDS126141 336 - 0.39881
NA LIC12822 conserved hypothetical proteinchromosome I CDS3425034 768 - 0.377604
NA LIC12917 conserved hypothetical proteinchromosome I CDS3542494 273 + 0.347985
NA LIC10980 transposase, IS1501chromosome I CDS1186497 846 - 0.390071
NA LIC11323 methyltransferase DNA modification enzymechromosome I CDS1632977 1152 + 0.345486
NA LIC10884 transposase, ISlin1chromosome I CDS1070404 396 + 0.424242
NA LIC20067 MutT-like proteinchromosome II CDS73327 588 + 0.37585
NA LIC13068 transposase, ISlin1chromosome I CDS3744618 606 - 0.364686
NA LIC10981 transposase, IS1501chromosome I CDS1187339 306 - 0.421569
NA LIC10503 transposase, IS3chromosome I CDS599481 1353 - 0.356984
NA LIC10005 DNA gyrase subunit Bchromosome I CDS6686 1920 + 0.371354
NA LIC12552 conserved hypothetical proteinchromosome I CDS3091198 720 + 0.326389
NA LIC12277 conserved hypothetical proteinchromosome I CDS2749190 729 - 0.342936
NA LIC12894 conserved hypothetical proteinchromosome I CDS3495061 2175 - 0.408276
NA LIC11346 transposase, IS1501chromosome I CDS1661149 627 - 0.393939
NA LIC10941 conserved hypothetical proteinchromosome I CDS1134467 285 - 0.375439
NA LIC13150 ATP-dependent DNA helicase proteinchromosome I CDS3860811 2175 + 0.382069
NA LIC11514 conserved hypothetical proteinchromosome I CDS1870683 369 + 0.360434
NA LIC10482 conserved hypothetical proteinchromosome I CDS559027 582 + 0.357388
NA LIC10656 transposase, ISlin1chromosome I CDS800133 1074 + 0.367784
NA LIC10724 conserved hypothetical proteinchromosome I CDS882540 957 + 0.359457
NA LIC11167 putative lipoproteinchromosome I CDS1436055 1155 + 0.34026
NA LIC13212 conserved hypothetical proteinchromosome I CDS3940560 837 - 0.348865
NA LIC10513 transposase, IS3chromosome I CDS617188 951 - 0.356467
NA LIC13160 transposase, ISlin1chromosome I CDS3870611 606 + 0.367987
NA LIC13116 transposase, ISlin1chromosome I CDS3811555 339 - 0.421829
NA LIC10380 conserved hypothetical proteinchromosome I CDS429918 546 + 0.333333
NA LIC10343 integrase/recombinasechromosome I CDS389169 603 + 0.325041
NA LIC11347 transposase, IS1501chromosome I CDS1661993 306 - 0.421569
NA LIC13159 transposase, ISlin1chromosome I CDS3870289 309 + 0.417476
NA LIC10263 transposase, ISlin1chromosome I CDS301007 396 + 0.429293
NA LIC13062 transposase, ISlin1chromosome I CDS3738385 606 + 0.361386
NA LIC13161 transposase, ISlin1chromosome I CDS3871222 360 + 0.377778
NA LIC10505 nuclease-like proteinchromosome I CDS601854 978 + 0.328221
NA LIC13264 MutT nudix family proteinchromosome I CDS4002327 672 + 0.361607
NA LIC12510 ATPasechromosome I CDS3039028 1272 - 0.398585
NA LIC13115 transposase, ISlin1chromosome I CDS3810912 606 - 0.358086
NA LIC11448 transposase, ISlin1chromosome I CDS1786765 381 - 0.383202
NA LIC12051 conserved hypothetical proteinchromosome I CDS2482018 3729 - 0.296326
NA LIC11848 conserved hypothetical proteinchromosome I CDS2242765 831 + 0.392298
NA LIC10826 putative lipoproteinchromosome I CDS1004318 603 + 0.273632
NA LIC10943 conserved hypothetical proteinchromosome I CDS1135774 630 - 0.406349
NA LIC12553 conserved hypothetical proteinchromosome I CDS3091895 903 + 0.321152
NA LIC13374 transposase, IS1500chromosome I CDS4137038 306 + 0.385621
NA LIC10885 transposase, ISlin1chromosome I CDS1070768 588 + 0.357143
NA LIC13067 transposase, ISlin1chromosome I CDS3744253 360 - 0.375
NA LIC20134 conserved hypothetical proteinchromosome II CDS157308 372 - 0.330645
NA LIC12588 ATP-dependent DNA helicasechromosome I CDS3134244 2025 - 0.381235
NA LIC10415 conserved hypothetical proteinchromosome I CDS473977 519 - 0.373796
NA LIC11564 conserved hypothetical proteinchromosome I CDS1925052 351 + 0.327635
NA LIC13389 DNA mismatch repair proteinchromosome I CDS4153049 1833 - 0.330606
NA LIC10238 3-methyladenine DNA glycosylasechromosome I CDS274139 687 + 0.356623
NA LIC10119 methylated-DNA--protein-cysteinemethyltransferasechromosome I CDS138884 414 - 0.350242
NA LIC11472 transposase, ISlin1chromosome I CDS1820076 606 - 0.371287
NA LIC13069 transposase, ISlin1chromosome I CDS3745261 273 - 0.406593
NA LIC20243 conserved hypothetical proteinchromosome II CDS306560 912 + 0.327851
NA LIC10599 conserved hypothetical proteinchromosome I CDS732816 678 - 0.39823
NA LIC10420 DNA helicase IIchromosome I CDS478459 1302 - 0.332565
NA LIC11450 transposase, ISlin1chromosome I CDS1787773 246 - 0.390244
ada LIC13402 methylated-DNA--protein-cysteine methyltransferase transcription regulatorchromosome I CDS4171728 831 - 0.350181
alkA LIC12362 3-methyladenine DNA glycosylasechromosome I CDS2862671 642 + 0.361371
dead LIC13230 ATP-dependent RNA helicasechromosome I CDS3965016 1566 + 0.386335
devR LIC10936 fruiting body developmental proteinchromosome I CDS1127708 840 - 0.482143
dinP LIC13052 DNA polymerase IVchromosome I CDS3724436 1095 + 0.360731
dnaA LIC10001 chromosomal replication initiator proteinchromosome I CDS292 1332 + 0.316066
dnaB LIC12109 replicative DNA helicasechromosome I CDS2551407 1329 - 0.410083
dnaC LIC13165 DNA replication protein DnaCchromosome I CDS3874453 858 - 0.39627
dnaE LIC10222 DNA polymerase III alpha subunitchromosome I CDS252892 3522 + 0.390687
dnaG LIC11702 DNA primasechromosome I CDS2069283 1797 - 0.376183
dnaN LIC10002 DNA polymerase III beta subunitchromosome I CDS3279 1122 + 0.323529
dnaX LIC13474 DNA polymerase III gamma subunitchromosome I CDS4248234 1440 + 0.357639
dshA LIC12756 DshAchromosome I CDS3353542 1053 - 0.312441
gyrA LIC10006 DNA gyrase subunit Achromosome I CDS8624 2505 + 0.363273
gyrB LIC13348 DNA gyrase subunit Bchromosome I CDS4104748 2136 + 0.374064
hepA LIC13220 ATP-dependent RNA helicasechromosome I CDS3951011 2847 - 0.354759
lig LIC13282 NAD dependent DNA ligasechromosome I CDS4024999 2046 - 0.371457
mfd LIC11455 transcription-repair coupling factorchromosome I CDS1792408 3561 + 0.364504
mutL LIC12514 DNA mismatch repair proteinchromosome I CDS3041807 1794 - 0.379599
mutS LIC11774 DNA mismatch repair proteinchromosome I CDS2164144 2547 + 0.348253
mutT LIC12191 mutator proteinchromosome I CDS2644632 435 - 0.347126
mutY LIC11614 A/G specific adenine glycosylasechromosome I CDS1975744 1128 + 0.345745
nth LIC11759 endonuclease IIIchromosome I CDS2151822 699 - 0.369099
nudH LIC13180 (Di)nucleoside polyphosphate hydrolasechromosome I CDS3891862 489 - 0.372188
phr LIC11339 deoxyribodipyrimidine photolyasechromosome I CDS1651973 1551 + 0.337202
polA LIC10586 DNA polymerase Ichromosome I CDS711562 2754 - 0.388163
priA LIC11551 primosomal protein N'chromosome I CDS1913874 1944 + 0.367798
recA LIC11745 recombinase Achromosome I CDS2130507 1101 + 0.389646
recB LIC12686 exodeoxyribonuclease V beta chainchromosome I CDS3256875 3102 - 0.336557
recC LIC12688 exodeoxyribonuclease v gamma chainchromosome I CDS3260005 3399 - 0.343336
recD LIC12685 exodeoxyribonuclease v alpha chainchromosome I CDS3255040 1854 - 0.333333
recF LIC10003 DNA repair and genetic recombination proteinchromosome I CDS5062 1098 + 0.304189
recG LIC11791 ATP-dependent DNA helicasechromosome I CDS2182516 1710 - 0.384211
recJ LIC11066 single-stranded DNA exonucleasechromosome I CDS1317692 1932 - 0.374224
recN LIC11620 DNA repair proteinchromosome I CDS1982343 1707 + 0.391916
recO LIC12104 RecOchromosome I CDS2544910 783 - 0.375479
recQ LIC12961 ATP-dependent DNA helicasechromosome I CDS3594524 1896 - 0.365506
recR LIC13476 RecRchromosome I CDS4250006 606 + 0.363036
rhlE LIC10738 ATP-dependent RNA helicasechromosome I CDS899573 1623 + 0.378928
rnhB LIC11560 ribonuclease HIIchromosome I CDS1921387 696 + 0.343391
ruvA LIC11148 DNA helicase subunit Achromosome I CDS1416118 639 + 0.319249
ruvB LIC12811 holliday junction DNA helicase proteinchromosome I CDS3416206 1026 - 0.39961
ruvC LIC12885 putative holliday junction endodeoxyribonuclease proteinchromosome I CDS3487108 573 - 0.371728
splB LIC10195 photoproduct lyasechromosome I CDS224064 1038 - 0.32659
ssb LIC12112 single-stranded DNA binding proteinchromosome I CDS2553535 453 - 0.408389
tag LIC13064 3-methyl-adenine DNA glycosylase Ichromosome I CDS3739853 594 - 0.335017
topA LIC12080 DNA topoisomerase I proteinchromosome I CDS2517693 1842 - 0.343648
uvrA LIC11717 nucleotide excision repair subunit A UVRABCchromosome I CDS2088124 2847 - 0.391289
uvrB LIC12941 nucleotide excision repair subunit Bchromosome I CDS3570065 2001 - 0.392304
uvrC LIC11756 nucleotide excision repair subunit Cchromosome I CDS2148564 1830 - 0.35082
uvrD LIC11624 ATP-dependent DNA helicasechromosome I CDS1988168 2199 + 0.363802
uvrD2 LIC11732 atp-dependent DNA helicasechromosome I CDS2110228 2019 + 0.347202
xerC LIC11599 putative integrase/recombinase proteinchromosome I CDS1958542 999 + 0.341341
xerD LIC11479 putative integrase/recombinase proteinchromosome I CDS1827759 897 + 0.347826
xseA LIC11591 exodeoxyribonuclease VII large subunitchromosome I CDS1950228 1269 - 0.377463
yoaA LIC12019 ATP-dependent helicasechromosome I CDS2432866 1977 + 0.371775
 
Leptospira interrogans serovar lai str. 56601
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA hypothetical proteinchromosome I CDS3183121 204 + 0.318627
NA unknown proteinchromosome I CDS1745026 633 + 0.319115
NA conserved hypothetical proteinchromosome I CDS432131 546 + 0.333333
NA unknown proteinchromosome I CDS895625 1632 + 0.35049
NA Integrase core domain containing proteinchromosome I CDS4323832 384 - 0.354167
NA transposasechromosome I CDS452072 1074 - 0.368715
NA putative outermembrane proteinchromosome I CDS2039412 831 - 0.392298
NA transposasechromosome I CDS2664384 300 + 0.383333
NA hypothetical proteinchromosome I CDS3869011 396 - 0.426768
NA MutT/nudix family proteinchromosome I CDS1582338 435 + 0.347126
NA transposasechromosome I CDS3499305 1074 - 0.367784
NA unknown proteinchromosome I CDS127279 435 - 0.390805
NA hypothetical proteinchromosome I CDS1561466 324 - 0.391975
NA methylated-DNA--protein-cysteine methyltransferase-related proteinchromosome I CDS139659 414 - 0.347826
NA DNA modification methylasechromosome I CDS2652828 1152 - 0.342882
NA transposasechromosome I CDS1560623 606 - 0.359736
NA conserved hypothetical proteinchromosome I CDS289363 627 - 0.373206
NA conserved hypothetical proteinchromosome I CDS3162771 285 + 0.375439
NA ATP-dependent RNA helicasechromosome I CDS3394804 1623 - 0.378312
NA conserved hypothetical proteinchromosome I CDS3630866 321 + 0.305296
NA hypothetical proteinchromosome I CDS1820108 366 + 0.308743
NA transposasechromosome I CDS3929476 1074 + 0.367784
NA conserved hypothetical proteinchromosome I CDS2356025 351 - 0.324786
NA transposasechromosome I CDS739314 402 - 0.393035
NA Staphylococcal nuclease family proteinchromosome I CDS3675558 978 - 0.328221
NA hypothetical proteinchromosome I CDS475443 417 - 0.347722
NA hypothetical proteinchromosome I CDS1745655 2511 + 0.289128
NA ATP-dependent RNA helicasechromosome I CDS4010598 2847 - 0.356164
NA DNA alkylation repair enzyme-like proteinchromosome I CDS1133382 687 - 0.331878
NA conserved hypothetical proteinchromosome I CDS1773218 336 + 0.366071
NA transposasechromosome I CDS711909 1074 + 0.368715
NA conserved hypothetical proteinchromosome I CDS4324190 495 - 0.383838
NA conserved hypothetical proteinchromosome I CDS846413 915 + 0.32459
NA transposasechromosome I CDS3148654 1074 - 0.368715
NA transposasechromosome I CDS640696 1074 - 0.367784
NA hypothetical proteinchromosome I CDS2449064 552 + 0.291667
NA Integrase core domain containing proteinchromosome I CDS1765453 804 - 0.365672
NA transposasechromosome I CDS415451 1074 + 0.368715
NA ADA regulatory proteinchromosome I CDS4226339 831 - 0.350181
NA transposasechromosome I CDS2884295 750 + 0.353333
NA transposasechromosome I CDS2497026 1074 + 0.373371
NA conserved hypothetical proteinchromosome I CDS3555756 606 + 0.412541
NA conserved hypothetical proteinchromosome I CDS2969765 699 - 0.386266
NA transposasechromosome I CDS917182 417 - 0.417266
NA transposasechromosome I CDS3249758 813 - 0.364084
NA transposasechromosome I CDS3220024 381 + 0.377953
NA transposasechromosome I CDS1442770 1074 - 0.368715
NA transposasechromosome I CDS3866398 1074 - 0.370577
NA conserved hypothetical proteinchromosome I CDS1278625 1233 + 0.36253
NA hypothetical proteinchromosome I CDS806685 768 + 0.377604
NA ribonuclease HIIchromosome I CDS2359353 351 - 0.336182
NA DNA-3-methyladenine glycosidase I tagchromosome I CDS3795646 606 - 0.330033
NA transposasechromosome I CDS2709735 1074 - 0.368715
NA transposasechromosome I CDS2464516 915 + 0.361749
NA transposasechromosome I CDS592733 1074 + 0.368715
NA transposasechromosome I CDS1739925 849 + 0.367491
NA hypothetical proteinchromosome I CDS1818227 486 + 0.261317
NA conserved hypothetical proteinchromosome I CDS2277721 1110 + 0.327928
NA conserved hypothetical proteinchromosome I CDS3161119 1653 + 0.402299
NA DNA-3-methyladenine glycosylasechromosome I CDS275430 687 + 0.355167
NA conserved hypothetical proteinchromosome I CDS688127 921 - 0.396308
NA transposasechromosome I CDS1011326 1074 + 0.368715
NA Integrase/recombinase xerDchromosome I CDS2456497 897 - 0.348941
NA conserved hypothetical proteinchromosome I CDS1126519 840 - 0.346429
NA conserved hypothetical proteinchromosome I CDS2452685 1695 + 0.375811
NA conserved hypothetical proteinchromosome I CDS686537 765 - 0.32549
NA ATP-dependent DNA helicasechromosome I CDS1848186 1977 - 0.372281
NA hypothetical proteinchromosome I CDS3221488 396 - 0.424242
NA Single-stranded DNA-binding proteinchromosome I CDS1674693 453 + 0.408389
NA conserved hypothetical proteinchromosome I CDS686357 177 - 0.38983
NA hypothetical proteinchromosome I CDS4291300 636 + 0.327044
NA conserved hypothetical proteinchromosome I CDS2675470 1251 + 0.364508
NA transposasechromosome I CDS2270606 1074 + 0.368715
NA transposasechromosome I CDS3174371 1074 + 0.367784
NA transposasechromosome I CDS1235783 1074 - 0.367784
NA conserved hypothetical proteinchromosome I CDS4289152 303 - 0.316832
NA conserved hypothetical proteinchromosome I CDS687555 273 - 0.322344
NA MutT/nudix family proteinchromosome I CDS1086749 579 - 0.367876
NA conserved hypothetical proteinchromosome I CDS1857770 1518 - 0.343215
NA unknown proteinchromosome I CDS3412500 957 - 0.355277
NA MutT/nudix family proteinchromosome I CDS4063746 672 + 0.361607
NA hypothetical proteinchromosome I CDS3023957 348 - 0.367816
NA SMF proteinchromosome I CDS3534058 984 - 0.368902
NA unknown proteinchromosome I CDS2586566 1986 - 0.41289
NA hypothetical proteinchromosome I CDS3023605 360 - 0.380556
NA transposasechromosome I CDS3868659 384 - 0.361979
NA putative outermembrane proteinchromosome I CDS1129025 1035 - 0.332367
NA hypothetical proteinchromosome I CDS3567640 306 - 0.372549
NA Integrase core domain containing proteinchromosome I CDS1793027 852 - 0.370892
NA transposasechromosome I CDS4043737 1074 + 0.367784
NA transposasechromosome I CDS1738969 546 - 0.39011
NA conserved hypothetical proteinchromosome I CDS2851461 1500 - 0.387333
NA putative helicasechromosome I CDS2068001 1905 + 0.362205
NA transposasechromosome I CDS3849260 1074 + 0.368715
NA transposasechromosome I CDS264684 1074 - 0.367784
NA transposasechromosome I CDS2635172 300 + 0.39
NA Putative methylasechromosome I CDS823908 567 + 0.347443
NA modification methylasechromosome I CDS1545931 1095 - 0.357078
NA unknown proteinchromosome I CDS1479829 729 + 0.341564
NA transposasechromosome I CDS3738864 300 + 0.383333
NA hypothetical proteinchromosome I CDS2258322 429 - 0.337995
NA transposasechromosome I CDS1793875 300 - 0.386667
NA Uracil-DNA glycosylasechromosome I CDS3850548 618 - 0.357605
NA conserved hypothetical proteinchromosome I CDS1585193 528 + 0.367424
NA conserved hypothetical proteinchromosome I CDS2757491 306 - 0.398693
NA transposasechromosome I CDS2501227 1074 + 0.368715
NA hypothetical proteinchromosome I CDS459302 582 - 0.333333
NA transposasechromosome I CDS3954536 1074 + 0.366853
NA transposasechromosome I CDS3567929 786 - 0.370229
NA transposasechromosome I CDS302379 1074 + 0.365922
NA transposasechromosome I CDS95097 1074 + 0.368715
NA transposasechromosome I CDS2664683 849 + 0.369847
NA transposasechromosome I CDS4324681 300 - 0.386667
NA transcription-repair coupling factorchromosome I CDS2488914 3561 - 0.365066
NA hypothetical proteinchromosome I CDS1059114 525 + 0.358095
NA hypothetical proteinchromosome I CDS3928076 711 + 0.367089
NA transposasechromosome I CDS3221037 483 - 0.362319
NA transposasechromosome I CDS1354666 1074 + 0.367784
NA transposasechromosome I CDS3290716 849 + 0.371025
NA hypothetical proteinchromosome I CDS4000122 837 - 0.34767
NA hypothetical proteinchromosome I CDS3718272 582 - 0.357388
NA transposasechromosome I CDS3447711 468 + 0.410256
NA unknown proteinchromosome I CDS1132502 903 - 0.321152
NA transposasechromosome I CDS1739626 300 + 0.393333
NA endonuclease IIIchromosome I CDS2130277 357 + 0.364146
NA transposasechromosome I CDS3928771 381 + 0.383202
NA transposasechromosome I CDS2839514 1074 + 0.368715
NA transposasechromosome I CDS3739163 849 + 0.372203
NA hypothetical proteinchromosome I CDS2410388 462 - 0.400433
NA DNA repair helicasechromosome I CDS2098231 1710 + 0.383041
NA Uracil-DNA glycosylasechromosome I CDS3619612 630 + 0.404762
NA conserved hypothetical proteinchromosome I CDS223749 1038 - 0.328516
NA Uncharacterized ATPase related to the helicase subunit of the Holliday junction resolvasechromosome I CDS1184812 1272 + 0.400943
NA transposasechromosome I CDS3447447 222 + 0.40991
NA transposasechromosome I CDS3219293 747 + 0.350736
NA conserved hypothetical proteinchromosome I CDS18259 1089 - 0.31405
NA hypothetical proteinchromosome I CDS2182503 591 - 0.270728
NA Probable integrase/recombinasechromosome I CDS390250 603 + 0.325041
NA purine NTPase, putativechromosome I CDS287046 2316 - 0.32513
NA transposasechromosome I CDS1461209 1074 + 0.368715
NA Integrase core domain containing proteinchromosome I CDS2635468 852 + 0.370892
NA Deoxyribodipyrimidine photolyasechromosome I CDS2632602 1551 - 0.337202
NA transposasechromosome I CDS3673787 951 + 0.356467
NA ATP-dependent RNA helicasechromosome I CDS4024617 1566 + 0.386973
NA unknown proteinchromosome I CDS3934973 921 + 0.400651
NA transposasechromosome I CDS3249393 381 - 0.367454
NA transposasechromosome I CDS3290417 300 + 0.386667
NA hypothetical proteinchromosome I CDS374654 300 - 0.296667
NA transposasechromosome I CDS3794099 1074 + 0.369646
NA transposasechromosome I CDS561278 1074 + 0.367784
NA putative lipoproteinchromosome I CDS1914832 198 - 0.343434
NA Single-strand binding proteinchromosome I CDS3599908 354 - 0.40113
NA conserved hypothetical proteinchromosome I CDS3200460 315 - 0.339683
NA transposasechromosome I CDS481684 1074 - 0.368715
NA Integrase core domain containing proteinchromosome I CDS3448175 414 + 0.381643
NA transposasechromosome I CDS784005 1074 + 0.368715
LB022 transposasechromosome II CDS18395 1074 + 0.365922
LB040 hypothetical proteinchromosome II CDS31361 267 - 0.299625
LB048 putative transposasechromosome II CDS37916 1074 + 0.368715
LB085 MutT/nudix family proteinchromosome II CDS75411 588 + 0.37585
LB122 site-specific integrase/recombinase XerD related proteinchromosome II CDS117169 900 - 0.355556
LB164 unknown protein confirmed by proteomicschromosome II CDS159124 372 - 0.330645
LB223 putative transposasechromosome II CDS217221 852 - 0.370892
LB224 putative transposasechromosome II CDS218069 306 - 0.385621
LB230 putative transposasechromosome II CDS226283 300 + 0.416667
LB231 putative transposasechromosome II CDS226579 846 + 0.382979
LB295 putative transposasechromosome II CDS294557 1074 + 0.366853
LB303 putative transposasechromosome II CDS301790 846 - 0.382979
LB304 putative transposasechromosome II CDS302632 306 - 0.415033
LB319 hypothetical proteinchromosome II CDS313463 912 + 0.328947
LB345 putative transposasechromosome II CDS334894 1074 - 0.364991
LB346 putative transposasechromosome II CDS336410 306 + 0.385621
devR fruiting body developmental protein R-like proteinchromosome I CDS3171685 840 + 0.477381
devS fruiting body developmental protein S-like proteinchromosome I CDS3172545 624 + 0.482372
dinP DNA damage-inducible proteinchromosome I CDS495409 1095 - 0.360731
dnaA chromosomal replication initiator proteinchromosome I CDS234 1332 + 0.315315
dnaB Replicative DNA helicase Bchromosome I CDS1675945 1329 + 0.411588
dnaC DNA replication protein Cchromosome I CDS3933429 858 - 0.397436
dnaE DNA polymerase III, subunit alphachromosome I CDS252765 3522 + 0.390403
dnaG DNA primasechromosome I CDS2211141 1797 + 0.375626
dnaN DNA polymerase III beta subunitchromosome I CDS3221 1122 + 0.321747
dnaX1 DNA polymerase III subunit gammachromosome I CDS4304597 1512 + 0.365079
dnaX2 DNA polymerase III subunits gamma and tauchromosome I CDS4331079 933 + 0.332262
dshA DshA proteinchromosome I CDS876052 1053 + 0.31529
exoA Exodeoxyribonucleasechromosome I CDS2494703 804 + 0.394279
gyrA1 DNA gyrase subunit Achromosome I CDS8564 2505 + 0.364471
gyrA2 DNA gyrase subunit Achromosome I CDS4161026 1389 + 0.367891
gyrB1 DNA gyrase subunit Bchromosome I CDS6626 1920 + 0.371875
gyrB2 DNA gyrase B subunitchromosome I CDS4162411 2136 + 0.373596
invA invasion-associated protein Achromosome I CDS3950471 489 - 0.376278
ligA DNA ligasechromosome I CDS4086408 2046 - 0.371945
mag1 DNA-3-methyladenine glycosylasechromosome I CDS1364293 642 - 0.361371
mutL DNA mismatch repair proteinchromosome I CDS1181483 1821 + 0.38056
mutS1 MutS proteinchromosome I CDS2115765 2547 - 0.346682
mutS2 DNA mismatch repair protein MutSchromosome I CDS2326843 369 - 0.368564
mutS3 MutS-like mismatch repair protein, ATPaseschromosome I CDS4208352 1833 - 0.332788
mutY A/G-specific DNA glycosylasechromosome I CDS2306429 1128 - 0.346631
pcrA1 ATP-dependent DNA helicase pcrAchromosome I CDS479892 1302 - 0.334101
pcrA2 ATP-dependent DNA helicase pcrAchromosome I CDS1087834 2025 + 0.379753
pcrA3 ATP-dependent DNA helicase pcrAchromosome I CDS2170218 2019 - 0.350173
pcrA4 ATP-dependent DNA helicase pcrAchromosome I CDS2292933 2199 - 0.365621
polA DNA polymerase Ichromosome I CDS3576611 2754 + 0.387073
priA Primosomal protein N'chromosome I CDS2365619 1944 - 0.365741
radC DNA repair protein radC homologchromosome I CDS1455981 699 + 0.412017
recA recA proteinchromosome I CDS2150850 1101 - 0.390554
recB exodeoxyribonuclease V, beta chainchromosome I CDS969823 3141 + 0.336835
recC exodeoxyribonuclease V, gamma chainchromosome I CDS966435 3399 + 0.343336
recD ATP-dependent exoDNAse, alpha subunitchromosome I CDS972945 1854 + 0.332255
recF RecF proteinchromosome I CDS5004 1098 + 0.306922
recG ATP-dependent DNA helicase recGchromosome I CDS3918427 2175 + 0.38069
recJ Single-stranded-DNA-specific exonuclease recJchromosome I CDS2976337 1932 + 0.373706
recN DNA repair protein RecNchromosome I CDS2299250 1707 - 0.391916
recO putative recombination protein Ochromosome I CDS1682988 783 + 0.378033
recQ1 DNA helicase RecQchromosome I CDS627888 1896 + 0.366561
recQ2 DNA helicase RecQchromosome I CDS964882 1449 - 0.343685
recR Recombination protein recRchromosome I CDS4306441 606 + 0.363036
rnhA ribonuclease H-like proteinchromosome I CDS1947579 390 - 0.4
ruvA Holliday junction DNA helicase ruvAchromosome I CDS2878308 639 - 0.320814
ruvB Holliday junction DNA helicase RuvB-like proteinchromosome I CDS815258 1026 + 0.398635
ruvC Holliday junction resolvasome endonuclease subunitchromosome I CDS743789 531 + 0.370998
tatD Putative deoxyribonuclease, tatD familychromosome I CDS4313561 810 - 0.332099
topA DNA topoisomerase Ichromosome I CDS1710779 1842 + 0.344734
uvrA Excinuclease ABC subunit Achromosome I CDS2191724 2847 + 0.392694
uvrB Excinuclease ABC subunit Bchromosome I CDS653581 2001 + 0.392304
uvrC excinuclease ABC, subunit Cchromosome I CDS2132062 1830 + 0.35082
xerC Integrase/recombinase xerCchromosome I CDS2323581 957 - 0.341693
xseA Probable exodeoxyribonuclease VII large subunitchromosome I CDS2332238 1269 + 0.382191
xseB Probable exodeoxyribonuclease VII small subunitchromosome I CDS2333508 288 + 0.333333
 
Treponema denticola ATCC 35405
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA TDE2244 conserved hypothetical proteinchromosome CDS2283160 1221 + 0.353808
NA TDE1137 conserved hypothetical proteinchromosome CDS1166156 684 - 0.323099
NA TDE2742 site-specific recombinase, phage integrase familychromosome CDS2796940 810 - 0.393827
NA TDE2029 hydrolase, TatD familychromosome CDS2057238 855 - 0.422222
NA TDE1891 conserved hypothetical proteinchromosome CDS1911346 765 + 0.330719
NA TDE2505 hypothetical proteinchromosome CDS2530265 417 + 0.410072
NA TDE0729 conserved hypothetical proteinchromosome CDS768198 1017 - 0.352999
NA TDE1209 site-specific recombinase, phage integrase familychromosome CDS1242485 918 + 0.360566
NA TDE1999 DNA polymerase III domain proteinchromosome CDS2017203 654 + 0.437309
NA TDE2486 hypothetical proteinchromosome CDS2509377 555 + 0.259459
NA TDE2265 hypothetical proteinchromosome CDS2302305 390 + 0.358974
NA TDE0556 hypothetical proteinchromosome CDS591628 555 - 0.4
NA TDE1844 DNA integrasechromosome CDS1873287 1008 - 0.440476
NA TDE0010 MutT/nudix family proteinchromosome CDS14720 567 + 0.396825
NA TDE0140 ISTde2, transposasechromosome CDS162871 1077 + 0.31662
NA TDE1611 conserved domain proteinchromosome CDS1659841 654 + 0.288991
NA TDE2303 conserved hypothetical proteinchromosome CDS2343195 393 + 0.343511
NA TDE2472 ISTde1, transposasechromosome CDS2495102 1185 + 0.348523
NA TDE1881 methyltransferase, putativechromosome CDS1903140 552 + 0.396739
NA TDE2176 site-specific recombinase, putativechromosome CDS2204491 1839 - 0.364328
NA TDE1825 hypothetical proteinchromosome CDS1857340 1095 - 0.276712
NA TDE0730 hypothetical proteinchromosome CDS769286 1392 - 0.324713
NA TDE1573 DNA-damage-inducible protein J, putativechromosome CDS1621631 258 - 0.313953
NA TDE2721 helicase domain proteinchromosome CDS2777923 1773 - 0.455161
NA TDE2118 topoisomerase IV, A subunit, putativechromosome CDS2149244 2112 - 0.436553
NA TDE1875 hypothetical proteinchromosome CDS1895896 1101 - 0.333333
NA TDE0266 conserved hypothetical proteinchromosome CDS297857 792 - 0.310606
NA TDE2221 conserved hypothetical proteinchromosome CDS2262824 1035 + 0.355556
NA TDE2463 hypothetical proteinchromosome CDS2488630 624 + 0.38141
NA TDE0193 conserved hypothetical proteinchromosome CDS228703 1977 - 0.3217
NA TDE0099 adenine-specific DNA modification methyltransferasechromosome CDS115788 1287 + 0.353535
NA TDE2581 hypothetical proteinchromosome CDS2610922 771 + 0.246433
NA TDE0006 Snf2 family proteinchromosome CDS6200 3585 - 0.407252
NA TDE2751 conserved hypothetical proteinchromosome CDS2807710 1545 + 0.390939
NA TDE2586 DNA polymerase III, gamma and tau subunits, putativechromosome CDS2620341 1839 - 0.430669
NA TDE2033 ISTde1, transposasechromosome CDS2060382 1185 - 0.348523
NA TDE2266 reverse transcriptase family proteinchromosome CDS2303132 987 - 0.321175
NA TDE0039 ISTde1, transposasechromosome CDS44579 1185 - 0.348523
NA TDE1709 DNA-binding protein, HU familychromosome CDS1764909 321 - 0.398754
NA TDE1398 conserved hypothetical proteinchromosome CDS1437332 2187 + 0.400549
NA TDE1280 conserved hypothetical proteinchromosome CDS1315840 702 - 0.366097
NA TDE0229 ATPase family proteinchromosome CDS260956 1881 - 0.246677
NA TDE2530 radical SAM domain proteinchromosome CDS2557502 828 + 0.359903
NA TDE2592 DbpA RNA binding domain proteinchromosome CDS2627166 627 + 0.374801
NA TDE2660 conserved hypothetical proteinchromosome CDS2697248 360 - 0.377778
NA TDE2679 conserved hypothetical proteinchromosome CDS2719658 885 + 0.314124
NA TDE2682 conserved hypothetical proteinchromosome CDS2721478 1971 - 0.411466
NA TDE0966 hydrolase, TatD familychromosome CDS991490 822 - 0.358881
NA TDE1654 ATP-dependent helicase HrpA, putativechromosome CDS1702359 2613 + 0.41217
NA TDE2219 membrane protein, putativechromosome CDS2259051 1686 - 0.396797
NA TDE2109 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS2133665 1713 - 0.446001
NA TDE0738 conserved hypothetical proteinchromosome CDS775764 261 - 0.35249
NA TDE2335 ATP-dependent DNA helicase, UvrD/Rep familychromosome CDS2369781 2238 + 0.424486
NA TDE2015 lipoprotein, putativechromosome CDS2036501 1122 - 0.262923
NA TDE2734 hypothetical proteinchromosome CDS2789211 711 + 0.523207
NA TDE0427 hypothetical proteinchromosome CDS483166 1374 + 0.283843
NA TDE2705 ISTde3, transposasechromosome CDS2751217 639 - 0.314554
NA TDE1721 radical SAM domain proteinchromosome CDS1775280 909 + 0.458746
NA TDE1990 ATP-dependent helicase, DinG familychromosome CDS2006457 2130 - 0.399531
NA TDE1607 MutT/nudix family proteinchromosome CDS1657097 525 - 0.293333
NA TDE2491 DNA polymerase domain proteinchromosome CDS2514795 795 - 0.466667
NA TDE0170 nuclease SbcCD, D subunit, putativechromosome CDS198929 1152 + 0.405382
NA TDE0506 DNA-damage-inducible protein J, putativechromosome CDS558535 273 - 0.326007
NA TDE0435 ATP-dependent DNA helicase, RecQ familychromosome CDS489648 1704 - 0.441315
NA TDE1971 DNA polymerase III domain proteinchromosome CDS1985831 1290 - 0.391473
NA TDE2588 integrase domain proteinchromosome CDS2623636 1203 + 0.39069
NA TDE2730 hydrolase, TatD familychromosome CDS2786726 774 + 0.427649
NA TDE1450 MutS2 family proteinchromosome CDS1495460 2457 + 0.404151
NA TDE0171 nuclease SbcCD, C subunit, putativechromosome CDS200105 3093 + 0.396056
NA TDE0199 hypothetical proteinchromosome CDS234289 510 - 0.390196
NA TDE0706 adenine-specific DNA modification methyltransferasechromosome CDS740560 1113 + 0.319856
NA TDE1752 ISTde2, transposasechromosome CDS1804412 1077 - 0.31662
NA TDE0721 hypothetical proteinchromosome CDS756891 1386 + 0.251804
NA TDE0227 adenine-specific DNA modification methyltransferasechromosome CDS257076 2634 + 0.250949
NA TDE2587 endonuclease/exonuclease/phosphatase family proteinchromosome CDS2622331 1020 + 0.40098
NA TDE0302 conserved hypothetical proteinchromosome CDS333363 279 + 0.333333
NA TDE1786 hypothetical proteinchromosome CDS1825195 1044 - 0.241379
NA TDE0363 conserved hypothetical proteinchromosome CDS409626 444 - 0.268018
NA TDE0016 ATPase, AAA familychromosome CDS20597 1326 + 0.450226
NA TDE1620 hypothetical proteinchromosome CDS1667049 2004 - 0.33982
NA TDE0085 ATP-dependent DNA helicase, UvrD/Rep familychromosome CDS97686 3420 - 0.332749
NA TDE0441 hypothetical proteinchromosome CDS496466 270 - 0.248148
NA TDE2267 HRDC domain proteinchromosome CDS2304072 483 - 0.325052
NA TDE2245 topoisomerase IV, B subunit, putativechromosome CDS2284380 1818 + 0.428493
NA TDE0086 conserved hypothetical proteinchromosome CDS101129 2838 - 0.324524
NA TDE0663 conserved hypothetical proteinchromosome CDS697930 258 - 0.310078
NA TDE0938 conserved hypothetical proteinchromosome CDS961053 1212 - 0.441419
NA TDE1991 conserved hypothetical proteinchromosome CDS2008724 765 - 0.29281
NA TDE1207 DNA processing protein DprA, putativechromosome CDS1239376 933 + 0.39657
NA TDE1173 site-specific recombinase, phage integrase familychromosome CDS1201347 1065 - 0.414084
NA TDE2135 conserved hypothetical proteinchromosome CDS2164726 753 + 0.298805
NA TDE1621 conserved hypothetical proteinchromosome CDS1669043 1791 - 0.340034
NA TDE1022 ISTde2, transposasechromosome CDS1054002 1077 - 0.317549
cas1 TDE0328 CRISPR-associated protein Cas1chromosome CDS365205 873 + 0.327606
dinB TDE0963 DNA polymerase IVchromosome CDS986035 1188 + 0.367845
dnaA TDE0001 chromosomal replication initiator protein DnaAchromosome CDS166 1410 - 0.382979
dnaB TDE1662 replicative DNA helicasechromosome CDS1716038 1338 + 0.423767
dnaE TDE2786 DNA polymerase III, alpha subunitchromosome CDS2839313 3450 - 0.417971
dnaG TDE1345 DNA primasechromosome CDS1383579 1788 + 0.393736
dnaN TDE0231 DNA polymerase III, beta subunitchromosome CDS263980 1104 - 0.319746
gyrA TDE0295 DNA gyrase, A subunitchromosome CDS324310 2448 - 0.45098
gyrB TDE0002 DNA gyrase, B subunitchromosome CDS1684 1917 + 0.449139
ligA TDE1538 DNA ligase, NAD-dependentchromosome CDS1581708 1938 + 0.421569
mfd TDE1287 transcription-repair coupling factorchromosome CDS1322878 3468 + 0.400519
mutS TDE2603 DNA mismatch repair protein MutSchromosome CDS2641616 2676 + 0.433109
mutT TDE0299 mutator mutT proteinchromosome CDS330220 420 + 0.366667
nth TDE2534 endonuclease IIIchromosome CDS2560284 633 + 0.407583
ogt TDE0217 methylated-DNA--protein-cysteinemethyltransferasechromosome CDS252688 519 + 0.34104
pcrA TDE0903 ATP-dependent DNA helicase PcrAchromosome CDS920368 1989 + 0.426345
polA TDE1637 DNA polymerase Ichromosome CDS1686212 2811 + 0.421558
priA TDE2490 primosomal protein N'chromosome CDS2512793 1983 - 0.450328
radC TDE0973 DNA repair protein RadCchromosome CDS998030 678 - 0.435103
recA TDE0872 recA proteinchromosome CDS894981 1245 + 0.460241
recF TDE0230 DNA replication and repair protein RecFchromosome CDS262889 1083 - 0.354571
recG TDE2579 ATP-dependent DNA helicase RecGchromosome CDS2603378 2037 - 0.459499
recJ TDE2190 single-stranded-DNA-specific exonuclease RecJchromosome CDS2224251 2133 - 0.423347
recN TDE1301 DNA repair protein RecNchromosome CDS1337521 1686 - 0.414591
recO TDE0436 Recombination protein Ochromosome CDS491414 810 - 0.432099
recQ TDE0326 ATP-dependent DNA helicase RecQchromosome CDS358838 1881 - 0.397661
recR TDE1549 recombination protein RecRchromosome CDS1592280 588 + 0.438776
rnhA TDE2570 ribonuclease HIchromosome CDS2597515 483 + 0.447205
rnhB TDE1547 ribonuclease HIIchromosome CDS1591264 597 + 0.358459
ruvA TDE1863 Holliday junction DNA helicase RuvAchromosome CDS1888064 606 - 0.438944
ruvB TDE1914 Holliday junction DNA helicase RuvBchromosome CDS1930979 1032 - 0.516473
ruvC TDE1864 crossover junction endodeoxyribonuclease RuvCchromosome CDS1888662 537 - 0.426443
ssb TDE1677 single-strand binding proteinchromosome CDS1729773 507 - 0.455621
tdeIR TDE1268 type II restriction endonuclease TdeIchromosome CDS1303110 771 - 0.29572
topA TDE1208 DNA topoisomerase Ichromosome CDS1240327 2166 + 0.371653
uvrA TDE1010 excinuclease ABC, A subunitchromosome CDS1035367 2865 + 0.464572
uvrB TDE1369 excinuclease ABC, B subunitchromosome CDS1409894 1989 - 0.42735
uvrC TDE2478 excinuclease ABC, C subunitchromosome CDS2501013 1959 + 0.444615
xerD TDE1205 integrase/recombinase XerDchromosome CDS1237829 825 + 0.349091
xseA TDE1017 exodeoxyribonuclease VII, large subunitchromosome CDS1048075 1197 + 0.440267
xseB TDE2066 exodeoxyribonuclease VII, small subunitchromosome CDS2092046 237 + 0.400844
xth TDE1734 exodeoxyribonuclease IIIchromosome CDS1788753 771 + 0.426719
 
Treponema pallidum
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
TP0001 chromosomal replication initiator protein (dnaA)chromosome CDS4 1395 + 0.407168
TP0002 DNA polymerase III, subunit beta (dnaN)chromosome CDS1641 1116 + 0.413082
TP0003 recF protein (recF)chromosome CDS2623 1212 + 0.435644
TP0005 DNA gyrase, subunit A (gyrA)chromosome CDS4391 2442 + 0.47543
TP0014 T. pallidum predicted coding region TP0014chromosome CDS13167 609 + 0.489327
TP0058 replicative DNA helicase (dnaB)chromosome CDS67640 1317 - 0.529992
TP0062 single-strand DNA binding protein (ssb)chromosome CDS70165 531 - 0.538606
TP0065 conserved hypothetical proteinchromosome CDS71776 588 + 0.498299
TP0102 rep helicase, single-stranded DNA-dependent ATPase (rep)chromosome CDS109750 1974 - 0.450861
TP0103 ATP-dependent DNA helicase, putativechromosome CDS111788 1824 + 0.527412
TP0105 DNA polymerase I (polA)chromosome CDS115806 2994 + 0.447562
TP0116 excinuclease ABC, subunit B (uvrB)chromosome CDS132863 2007 + 0.453413
TP0125 exodeoxyribonuclease (exoA)chromosome CDS146754 795 + 0.566038
TP0141 methylated-DNA-protein-cysteine S-methyltransferase (dat)chromosome CDS161909 534 + 0.559925
TP0162 Holliday junction DNA helicase (ruvB)chromosome CDS183384 1053 - 0.585945
TP0229 DNA polymerase, bacteriophage-typechromosome CDS237401 834 + 0.555156
TP0230 primosomal protein N (priA)chromosome CDS238239 1974 + 0.562817
TP0251 DNA-binding protein IIchromosome CDS262929 318 + 0.54717
TP0303 DNA mismatch repair protein (mutL)chromosome CDS315967 1947 - 0.575244
TP0310 T. pallidum predicted coding region TP0310chromosome CDS326392 384 + 0.585938
TP0328 DNA mismatch repair protein (mutS)chromosome CDS347468 2703 + 0.540881
TP0343 A/G-specific adenine glycosylase, putativechromosome CDS365621 834 + 0.495204
TP0344 transcription-repair coupling factor (trcF)chromosome CDS366459 3423 - 0.496348
TP0353 ribonuclease H (rnhA)chromosome CDS377198 510 - 0.6
TP0380 DNA repair helicase, putativechromosome CDS405261 1821 - 0.548051
TP0391 integrase/recombinase (codV)chromosome CDS416004 921 + 0.5038
TP0393 smf protein (smf)chromosome CDS417663 909 + 0.49725
TP0394 DNA topoisomerase I (topA)chromosome CDS418604 2196 + 0.478142
TP0395 integrase/recombinase (xprB)chromosome CDS420792 894 + 0.517897
TP0442 DNA repair protein (recN)chromosome CDS467790 1722 + 0.551103
TP0472 excinuclease ABC, subunit C (uvrC)chromosome CDS499677 2076 - 0.507225
TP0492 DNA primase (dnaG)chromosome CDS526077 1818 + 0.510451
TP0514 excinuclease ABC, subunit A (uvrA)chromosome CDS550459 2883 + 0.473118
TP0517 Holliday junction nuclease (ruvC)chromosome CDS557904 591 - 0.468697
TP0521 DNA polymerase III, gamma and tau subunits, putativechromosome CDS561736 1272 - 0.495283
TP0526 ATP-dependent helicase (hrpA)chromosome CDS568144 2007 + 0.494768
TP0543 Holliday junction DNA helicase (ruvA)chromosome CDS584926 684 - 0.520468
TP0588 conserved hypothetical proteinchromosome CDS639853 765 - 0.482353
TP0626 exonuclease, putativechromosome CDS681001 1176 + 0.491497
TP0627 exonuclease (sbcC)chromosome CDS682173 3144 + 0.465649
TP0634 DNA ligase (lig)chromosome CDS692381 2472 + 0.511731
TP0636 conserved hypothetical proteinchromosome CDS694887 771 - 0.511025
TP0643 DNA polymerase III, subunit epsilon (dnaQ)chromosome CDS704799 648 + 0.466049
TP0669 DNA polymerase III, subunit alpha (dnaE)chromosome CDS730608 3513 - 0.44378
TP0687 DNA recombinase (recG)chromosome CDS752821 2061 - 0.425036
TP0692 recA protein (recA)chromosome CDS758729 1224 - 0.510621
TP0704 single-stranded-DNA-specific exonuclease (recJ)chromosome CDS768570 2121 - 0.532296
TP0710 conserved hypothetical proteinchromosome CDS776685 1971 + 0.523085
TP0731 conserved hypothetical proteinchromosome CDS796674 711 + 0.589311
TP0770 ATP-dependent RNA helicasechromosome CDS835978 1950 + 0.534872
TP0775 endonuclease III (nth)chromosome CDS842892 636 + 0.551887
TP0810 DNA adenine methyltransferase (dam)chromosome CDS878660 912 + 0.550439
TP0898 ATP-dependent nuclease, subunit A, putativechromosome CDS975830 3720 - 0.579839
TP0899 T. pallidum predicted coding region TP0899chromosome CDS979546 588 - 0.537415
TP0913 conserved hypothetical proteinchromosome CDS991495 381 + 0.488189
TP0979 conserved hypothetical proteinchromosome CDS1062241 774 + 0.516796
TP0994 conserved hypothetical proteinchromosome CDS1078616 810 + 0.546914
TP1004 recombination protein (recR)chromosome CDS1092553 606 - 0.559406
TP1005 DNA polymerase III, subunits gamma and tau (dnaH)chromosome CDS1093232 1719 - 0.504363
TP1006 DNA gyrase, subunit B (gyrB)chromosome CDS1095009 1914 - 0.483804
TP1028 DNA helicase II (uvrD)chromosome CDS1121029 2013 - 0.554396
TP1029 T. pallidum predicted coding region TP1029chromosome CDS1123124 687 - 0.614265
 
Treponema pallidum subsp. pallidum SS14, SS14
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA TPASS_0899 hypothetical proteinchromosome CDS980991 588 - 0.537415
NA TPASS_1029 hypothetical proteinchromosome CDS1124569 687 - 0.612809
NA TPASS_0014 hypothetical proteinchromosome CDS13164 609 + 0.489327
NA TPASS_0588 hypothetical proteinchromosome CDS641303 765 - 0.482353
NA TPASS_0979 hypothetical proteinchromosome CDS1063686 774 + 0.516796
NA TPASS_0731 hypothetical proteinchromosome CDS798122 711 + 0.589311
NA TPASS_0913 hypothetical proteinchromosome CDS992940 381 + 0.488189
NA TPASS_0343 possible A/G-specific adenine glycosylasechromosome CDS366801 834 + 0.495204
NA TPASS_0898 possible ATP-dependent nuclease, subunit Achromosome CDS977275 3720 - 0.580376
NA TPASS_0380 possible DNA repair helicasechromosome CDS406441 1821 - 0.548051
NA TPASS_0408 hypothetical proteinchromosome CDS432893 3255 + 0.503533
NA TPASS_0994 hypothetical proteinchromosome CDS1080061 810 + 0.546914
NA TPASS_0229 DNA polymerase, bacteriophage-typechromosome CDS238584 834 + 0.555156
NA TPASS_0251 DNA-binding protein IIchromosome CDS264112 318 + 0.54717
NA TPASS_0626 possible exonucleasechromosome CDS682455 1176 + 0.491497
NA TPASS_0710 hypothetical proteinchromosome CDS778133 1971 + 0.523085
NA TPASS_0636 hypothetical proteinchromosome CDS696341 771 - 0.511025
NA TPASS_0521 possible DNA polymerase III, gamma and tau subunitschromosome CDS563168 1272 - 0.496069
NA TPASS_0770 ATP-dependent RNA helicasechromosome CDS837426 1950 + 0.535385
NA TPASS_0065 hypothetical proteinchromosome CDS71773 588 + 0.498299
NA TPASS_0103 possible ATP-dependent DNA helicasechromosome CDS111785 1824 + 0.527412
codV TPASS_0391 integrase/recombinasechromosome CDS417184 921 + 0.5038
dam TPASS_0810 DNA adenine methyltransferasechromosome CDS880108 912 + 0.550439
dat TPASS_0141 methylated-DNA-protein-cysteineS-methyltransferasechromosome CDS163092 534 + 0.559925
dnaA TPASS_0001 chromosomal replication initiation protein DnaAchromosome CDS4 1395 + 0.407168
dnaB TPASS_0058 replicative DNA helicase DnaBchromosome CDS67637 1317 - 0.529992
dnaE TPASS_0669 DNA polymerase III, subunit alphachromosome CDS732056 3513 - 0.44378
dnaG TPASS_0492 DNA primasechromosome CDS527509 1818 + 0.511001
dnaN TPASS_0002 DNA-directed DNA polymerase beta subunitchromosome CDS1641 1116 + 0.413082
dnaQ TPASS_0643 DNA polymerase III, subunit epsilonchromosome CDS706253 648 + 0.466049
dnaZX TPASS_1005 DNA polymerase III, subunits gamma and tauchromosome CDS1094677 1719 - 0.504363
exoA TPASS_0125 exodeoxyribonucleasechromosome CDS146751 795 + 0.566038
gyrA TPASS_0005 DNA topoisomerase (ATP-hydrolyzing) subunit Achromosome CDS4391 2442 + 0.47502
gyrB TPASS_1006 DNA gyrase, subunit Bchromosome CDS1096454 1914 - 0.483804
hrpA TPASS_0526 ATP-dependent helicasechromosome CDS569576 2007 + 0.494768
lig TPASS_0634 DNA ligasechromosome CDS693835 2472 + 0.511731
mutL TPASS_0303 DNA mismatch repair protein MutLchromosome CDS317150 1947 - 0.575244
mutS TPASS_0328 DNA mismatch repair protein MutSchromosome CDS348648 2703 + 0.540881
nth TPASS_0775 endonuclease IIIchromosome CDS844340 636 + 0.551887
polA TPASS_0105 DNA polymerase Ichromosome CDS115803 2994 + 0.447562
priA TPASS_0230 primosomal protein Nchromosome CDS239422 1974 + 0.563323
recA TPASS_0692 protein RecAchromosome CDS760177 1224 - 0.510621
recF TPASS_0003 recombination protein RecFchromosome CDS2623 1212 + 0.435644
recG TPASS_0687 DNA recombinasechromosome CDS754269 2061 - 0.425036
recJ TPASS_0704 single-stranded-DNA-specific exonucleasechromosome CDS770018 2121 - 0.532296
recN TPASS_0442 DNA repair proteinchromosome CDS469389 1722 + 0.551103
recR TPASS_1004 recombination protein RecRchromosome CDS1093998 606 - 0.559406
rep TPASS_0102 Rep helicase, single-stranded DNA-dependent ATPasechromosome CDS109747 1974 - 0.450861
rnhA TPASS_0353 ribonuclease Hchromosome CDS378378 510 - 0.6
ruvA TPASS_0543 Holliday junction DNA helicase, subunit Achromosome CDS586358 684 - 0.520468
ruvB TPASS_0162 Holliday junction DNA helicase, subunit Bchromosome CDS184567 1053 - 0.585945
ruvC TPASS_0517 Holliday junction nuclease, subunit Cchromosome CDS559336 591 - 0.468697
sbcC TPASS_0627 exonucleasechromosome CDS683627 3144 + 0.465649
smf TPASS_0393 protein Smfchromosome CDS418843 909 + 0.49725
ssb TPASS_0062 single-strand DNA binding protein Ssbchromosome CDS70162 531 - 0.538606
topA TPASS_0394 DNA topoisomerase Ichromosome CDS419784 2196 + 0.478597
trcF TPASS_0344 transcription-repair coupling factorchromosome CDS367639 3423 - 0.49664
uvrA TPASS_0514 excinuclease ABC, subunit Achromosome CDS551891 2883 + 0.473118
uvrB TPASS_0116 excinuclease ABC, subunit Bchromosome CDS132860 2007 + 0.453413
uvrC TPASS_0472 excinuclease ABC, subunit Cchromosome CDS501109 2076 - 0.507225
uvrD TPASS_1028 DNA helicase IIchromosome CDS1122474 2013 - 0.5539
xprB TPASS_0395 integrase/recombinasechromosome CDS421972 894 + 0.517897