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2024-05-21 15:13:32

Gene list

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COG category: Transcription

Number of genes found: 1233

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Borrelia afzelii, PKo
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BAPKO_0553 conserved hypothetical proteinPKO-g-P-chrIn1v1.w1 CDS541420 777 + 0.262548
NA BAPKO_0356 fibronectin/fibrinogen-binding protein, putativePKO-g-P-chrIn1v1.w1 CDS354298 1419 + 0.24172
NA BAPKO_0364 transcription factor, putativePKO-g-P-chrIn1v1.w1 CDS363920 489 - 0.282209
NA BAPKO_0775 hypothetical proteinPKO-g-P-chrIn1v1.w1 CDS774955 402 - 0.218905
NA BAPKO_0833 hypothetical proteinPKO-g-P-chrIn1v1.w1 CDS824705 1185 + 0.243882
greA BAPKO_0134 transcription elongation factorPKO-g-P-chrIn1v1.w1 CDS127075 2703 - 0.278579
mfd BAPKO_0663 transcription-repair coupling factorPKO-g-P-chrIn1v1.w1 CDS654189 3375 - 0.261333
ntrA BAPKO_0472 RNA polymerase sigma-54 factorPKO-g-P-chrIn1v1.w1 CDS473862 1260 - 0.243651
nusA BAPKO_0853 N-utilization substance protein APKO-g-P-chrIn1v1.w1 CDS846779 1449 + 0.31539
nusB BAPKO_0108 N-utilization substance protein BPKO-g-P-chrIn1v1.w1 CDS105101 414 - 0.289855
nusG BAPKO_0409 transcription antitermination factorPKO-g-P-chrIn1v1.w1 CDS409550 555 - 0.322523
recG BAPKO_0612 DNA recombinasePKO-g-P-chrIn1v1.w1 CDS600301 2061 + 0.311984
rho BAPKO_0239 transcription termination factor RhoPKO-g-P-chrIn1v1.w1 CDS234504 1548 - 0.322351
rnc BAPKO_0748 ribonuclease IIIPKO-g-P-chrIn1v1.w1 CDS744487 738 + 0.315718
rpoA BAPKO_0530 DNA-directed RNA polymerasePKO-g-P-chrIn1v1.w1 CDS511560 1035 + 0.302415
rpoB BAPKO_0404 DNA-directed RNA polymerasePKO-g-P-chrIn1v1.w1 CDS403897 3468 - 0.338235
rpoC BAPKO_0403 DNA-directed RNA polymerasePKO-g-P-chrIn1v1.w1 CDS399748 4134 - 0.329947
rpoD BAPKO_0756 RNA polymerase sigma-70 factorPKO-g-P-chrIn1v1.w1 CDS751926 1896 + 0.317511
rpoS BAPKO_0819 RNA polymerase sigma factorPKO-g-P-chrIn1v1.w1 CDS815946 801 - 0.285893
spo0J BAPKO_0455 stage 0 sporulation protein JPKO-g-P-chrIn1v1.w1 CDS455034 783 - 0.261814
spoT BAPKO_0200 guanosine-3,5-bis(diphosphate) 3- pyrophosphohydrolasePKO-g-P-chrIn1v1.w1 CDS195145 2004 + 0.290419
xylR-1 BAPKO_0737 xylose operon regulatory proteinPKO-g-P-chrIn1v1.w1 CDS737879 1209 + 0.286187
xylR-2 BAPKO_0884 xylose operon regulatory proteinPKO-g-P-chrIn1v1.w1 CDS882830 939 + 0.309904
 
Borrelia burgdorferi ZS7, ZS7
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BbuZS7_0734 RNA polymerase sigma factor RpoD (Sigma-70)chromosome CDS744126 1896 + 0.318565
NA BbuZS7_0359 putative transcription factorchromosome CDS364451 489 - 0.280164
NA BbuZS7_0714 xylose operon regulatory proteinchromosome CDS730083 1209 + 0.290323
NA BbuZS7_0535 putative transcriptional activator, Baf family proteinchromosome CDS533632 765 + 0.269281
NA BbuZS7_0756 conserved hypothetical proteinchromosome CDS767164 402 - 0.223881
NA BbuZS7_0830 transcription elongation protein NusAchromosome CDS839015 1449 + 0.31539
NA BbuZS7_A45 outer membrane proteinZS7_lp54 CDS34960 846 + 0.313239
NA BbuZS7_0812 conserved hypothetical proteinchromosome CDS817197 1185 + 0.243038
NA BbuZS7_0351 putative fibronectin/fibrinogen-binding proteinchromosome CDS354827 1419 + 0.243129
mfd BbuZS7_0642 transcription-repair coupling factorchromosome CDS646424 3378 - 0.267318
nusB BbuZS7_0107 transcription antitermination factor NusBchromosome CDS105365 429 - 0.282051
nusG BbuZS7_0396 transcription termination/antitermination factor NusGchromosome CDS406682 555 - 0.326126
rho BbuZS7_0235 transcription termination factor Rhochromosome CDS234961 1548 - 0.319121
rnc BbuZS7_0726 ribonuclease IIIchromosome CDS736690 738 + 0.306233
rpoA BbuZS7_0513 DNA-directed RNA polymerase, alpha subunitchromosome CDS503909 1035 + 0.309179
rpoB BbuZS7_0391 DNA-directed RNA polymerase, beta subunitchromosome CDS401031 3468 - 0.34083
rpoC BbuZS7_0390 DNA-directed RNA polymerase, beta subunitchromosome CDS396882 4134 - 0.332608
rpoN BbuZS7_0457 RNA polymerase sigma-54 factorchromosome CDS466059 1260 - 0.257143
rpoS BbuZS7_0799 RNA polymerase sigma factor (rpoS)chromosome CDS808442 801 - 0.282147
rpoZ BbuZS7_0850 DNA-directed RNA polymerase, omega subunitchromosome CDS862507 201 + 0.288557
spo0J BbuZS7_0440 stage 0 sporulation protein Jchromosome CDS447234 783 - 0.272031
 
Borrelia burgdorferi, B31
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BB_0831 xylose operon regulatory protein (xylR-2)chromosome CDS879303 948 + 0.306962
NA BB_0355 transcription factor, putativechromosome CDS365115 489 - 0.280164
NA BB_0347 fibronectin/fibrinogen-binding protein, putativechromosome CDS355482 1428 + 0.241597
NA BB_0820 predicted coding region BB0820chromosome CDS866494 201 + 0.288557
NA BB_0434 stage 0 sporulation protein J (spo0J)chromosome CDS451139 783 - 0.269476
NA BB_0693 xylose operon regulatory protein (xylR-1)chromosome CDS734081 1209 + 0.290323
NA BB_0800 N-utilization substance protein A (nusA)chromosome CDS843003 1449 + 0.31539
NA BB_0230 transcription termination factor Rho (rho)chromosome CDS235595 1548 - 0.319767
NA BB_0731 conserved hypothetical proteinchromosome CDS771162 402 - 0.223881
NA BB_0771 RNA polymerase sigma factor (rpoS)chromosome CDS812439 801 - 0.27965
NA BB_0527 conserved hypothetical proteinchromosome CDS537520 789 + 0.267427
NA BB_0783 predicted coding region BB0783chromosome CDS821185 1185 + 0.243882
NA BB_0389 DNA-directed RNA polymerase (rpoB)chromosome CDS401693 3468 - 0.340254
NA BB_A52 outer membrane proteinlp54 CDS34924 846 + 0.310875
NA BB_0705 ribonuclease III (rnc)chromosome CDS740685 741 + 0.310391
NA BB_0394 transcription antitermination factor (nusG)chromosome CDS407344 555 - 0.322523
NA BB_0712 RNA polymerase sigma-70 factor (rpoD)chromosome CDS748123 1896 + 0.319093
NA BB_0388 DNA-directed RNA polymerase (rpoC)chromosome CDS397544 4134 - 0.333575
NA BB_0450 RNA polymerase sigma-54 factor (ntrA)chromosome CDS469961 1260 - 0.253968
NA BB_0107 N-utilization substance protein B (nusB)chromosome CDS105418 438 - 0.287671
NA BB_0502 DNA-directed RNA polymerase (rpoA)chromosome CDS507811 1038 + 0.309249
 
Borrelia duttonii Ly, Ly
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BDU_526 pantothenate kinasechromosome CDS551317 795 + 0.266667
NA BDU_346 fibronectin/fibrinogen-binding protein, putativechromosome CDS369828 1410 + 0.232624
NA BDU_353 transcription factor, putativechromosome CDS379434 486 - 0.296296
NA BDU_734 uncharacterized conserved proteinchromosome CDS783295 402 - 0.221393
NA BDU_523 Response regulator receiver (CheY) modulated Serine phosphatasechromosome CDS547215 1590 + 0.260377
NA BDU_788 uncharacterized conserved proteinchromosome CDS836619 1185 + 0.254008
greA BDU_136 transcription elongation factor EFchromosome CDS139463 2703 - 0.26822
mfd BDU_627 transcription-repair coupling factorchromosome CDS663116 3378 - 0.2537
ntrA BDU_449 RNA polymerase sigma-54 factorchromosome CDS482927 1257 - 0.244232
nusA BDU_808 N-utilization substance protein Achromosome CDS860397 1485 + 0.303704
nusB BDU_110 N-utilization substance protein Bchromosome CDS116428 441 - 0.278912
nusG BDU_388 transcription antitermination factorchromosome CDS419986 555 - 0.322523
recG BDU_584 DNA recombinasechromosome CDS613244 2064 + 0.291667
rho BDU_230 transcription termination factorchromosome CDS246478 1545 - 0.301618
rnc BDU_707 ribonuclease IIIchromosome CDS752901 732 + 0.29235
rpoA BDU_505 DNA-directed RNA polymerasechromosome CDS520838 1032 + 0.295543
rpoB BDU_383 DNA-directed RNA polymerase beta chainchromosome CDS414326 3468 - 0.329873
rpoC BDU_382 DNA-directed RNA polymerase beta' chainchromosome CDS410178 4134 - 0.325593
rpoD BDU_715 RNA polymerase sigma-70 factorchromosome CDS760321 1893 + 0.304807
rpoS BDU_775 RNA polymerase sigma factorchromosome CDS827814 804 - 0.268657
spo0J BDU_431 stage 0 sporulation protein Jchromosome CDS462747 783 - 0.260536
spoT BDU_196 guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolasechromosome CDS205811 2004 + 0.266467
vlp-d BDU_9001 vlp protein, delta subfamilypl31 CDS165 1050 - 0.364762
xylR-1 BDU_696 xylose operon regulatory proteinchromosome CDS745716 1209 + 0.287841
xylR-2 BDU_843 xylose operon regulatory proteinchromosome CDS903368 951 + 0.297581
 
Borrelia garinii High passage (300), PBi
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA NC_006156.1_823 hypothetical proteinNC_006156.1 CDS868381 201 + 0.298507
NA NC_006156.1_351 transcription factor, putativeNC_006156.1 CDS363862 489 - 0.292434
NA PBI300a20b10.r1_29 hypothetical proteinPBI300a20b10.r1 CDS19091 324 + 0.231481
NA NC_006156.1_735 hypothetical proteinNC_006156.1 CDS776539 786 + 0.291349
NA NC_006156.1_724 hypothetical proteinNC_006156.1 CDS762100 1446 + 0.246888
NA NC_006156.1_733 hypothetical proteinNC_006156.1 CDS773047 402 - 0.228856
NA NC_006156.1_343 fibronectin/fibrinogen-binding protein, putativeNC_006156.1 CDS354237 1419 + 0.2537
NA NC_006156.1_528 hypothetical proteinNC_006156.1 CDS539697 789 + 0.259823
NA NC_006156.1_784 hypothetical proteinNC_006156.1 CDS823057 1185 + 0.244726
NA NC_006156.1_237 hypothetical proteinNC_006156.1 CDS242881 771 - 0.290532
greA NC_006156.1_133 transcription elongation factorNC_006156.1 CDS127250 2703 - 0.278949
mfd NC_006156.1_626 transcription-repair coupling factorNC_006156.1 CDS652342 3375 - 0.268741
ntrA NC_006156.1_453 RNA polymerase sigma-54 factorNC_006156.1 CDS472233 1260 - 0.247619
nusA NC_006156.1_803 N-utilization substance protein ANC_006156.1 CDS844922 1449 + 0.31608
nusB NC_006156.1_107 N-utilization substance protein BNC_006156.1 CDS105237 429 - 0.275058
nusG NC_006156.1_394 transcription antitermination factorNC_006156.1 CDS407989 555 - 0.320721
recG NC_006156.1_581 DNA recombinaseNC_006156.1 CDS598464 2061 + 0.306162
rho NC_006156.1_229 transcription termination factor RhoNC_006156.1 CDS234543 1548 - 0.312016
rnc NC_006156.1_708 ribonuclease IIINC_006156.1 CDS742577 738 + 0.327913
rpoA NC_006156.1_505 DNA-directed RNA polymeraseNC_006156.1 CDS510134 1035 + 0.304348
rpoB NC_006156.1_389 DNA-directed RNA polymeraseNC_006156.1 CDS402338 3468 - 0.343426
rpoC NC_006156.1_388 DNA-directed RNA polymeraseNC_006156.1 CDS398189 4134 - 0.329705
rpoD NC_006156.1_714 RNA polymerase sigma-70 factorNC_006156.1 CDS750016 1896 + 0.310654
rpoS NC_006156.1_771 RNA polymerase sigma factorNC_006156.1 CDS814300 801 - 0.27965
spo0J NC_006156.1_437 stage 0 sporulation protein JNC_006156.1 CDS453350 783 - 0.270754
spoT NC_006156.1_195 guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolaseNC_006156.1 CDS195285 2004 + 0.283433
xylR-1 NC_006156.1_696 xylose operon regulatory proteinNC_006156.1 CDS735993 1209 + 0.286187
xylR-2 NC_006156.1_836 xylose operon regulatory proteinNC_006156.1 CDS881249 936 + 0.29594
 
Borrelia garinii, PBi
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BGA72 conserved hypothetical proteinlp54 CDS51911 774 - 0.268734
NA BG0348 fibronectin/fibrinogen-binding protein, putativechromosome linear CDS354239 1419 + 0.2537
NA BG0536 conserved hypothetical proteinchromosome linear CDS539701 789 + 0.259823
NA BG0038 hypothetical proteinchromosome linear CDS36448 1539 - 0.252762
NA BG0845 hypothetical proteinchromosome linear CDS868386 201 + 0.298507
NA BG0753 conserved hypothetical proteinchromosome linear CDS773052 402 - 0.228856
NA BG0755 hypothetical proteinchromosome linear CDS776543 786 + 0.291349
NA BG0744 hypothetical proteinchromosome linear CDS762105 1446 + 0.246888
NA BG0356 transcription factor, putativechromosome linear CDS363864 489 - 0.292434
NA BG0241 hypothetical proteinchromosome linear CDS242882 771 - 0.290532
NA BG0807 hypothetical proteinchromosome linear CDS823062 1185 + 0.244726
NA BGA20 conserved hypothetical proteinlp54 CDS15991 324 + 0.231481
greA BG0134 transcription elongation factorchromosome linear CDS127251 2703 - 0.278949
mfd BG0642 transcription-repair coupling factorchromosome linear CDS652347 3375 - 0.268741
ntrA BG0458 RNA polymerase sigma-54 factorchromosome linear CDS472236 1158 - 0.253022
nusA BG0826 N-utilization substance protein Achromosome linear CDS844927 1449 + 0.31608
nusB BG0108 N-utilization substance protein Bchromosome linear CDS105238 429 - 0.275058
nusG BG0395 transcription antitermination factorchromosome linear CDS407992 555 - 0.320721
recG BG0593 DNA recombinasechromosome linear CDS598468 2061 + 0.306162
rho BG0233 transcription termination factor Rhochromosome linear CDS234544 1548 - 0.312016
rnc BG0727 ribonuclease IIIchromosome linear CDS742582 738 + 0.327913
rpoA BG0514 DNA-directed RNA polymerasechromosome linear CDS510137 1035 + 0.304348
rpoB BG0390 DNA-directed RNA polymerasechromosome linear CDS402341 3468 - 0.343426
rpoC BG0389 DNA-directed RNA polymerasechromosome linear CDS398192 4134 - 0.329705
rpoD BG0734 RNA polymerase sigma-70 factorchromosome linear CDS750021 1896 + 0.311181
rpoS BG0794 RNA polymerase sigma factorchromosome linear CDS814304 801 - 0.27965
spo0J BG0441 stage 0 sporulation protein Jchromosome linear CDS453353 783 - 0.270754
spoT BG0196 guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolasechromosome linear CDS195286 2004 + 0.283433
xylR-1 BG0716 xylose operon regulatory proteinchromosome linear CDS735998 1209 + 0.286187
xylR-2 BG0856 xylose operon regulatory proteinchromosome linear CDS881253 936 + 0.29594
 
Borrelia hermsii DAH, DAH
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BH0198 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolasechromosome CDS194456 2004 + 0.287425
NA BH0434 probable chromosome partitioning protein ParBchromosome CDS454705 813 - 0.281673
NA BH0623 transcription-repair coupling factorchromosome CDS657358 3369 - 0.28881
NA BH0389 DNA-directed RNA polymerase beta chainchromosome CDS403349 3468 - 0.345444
NA BH0230 transcription termination factor Rhochromosome CDS234786 1581 - 0.325743
NA BH0502 DNA-directed RNA polymerase alpha chainchromosome CDS513000 1035 + 0.317874
NA BH0522A transcriptional regulatory proteinchromosome CDS539919 1584 + 0.270202
NA BH0783 hypothetical proteinchromosome CDS832797 1185 + 0.268354
NA BH0712 RNA polymerase sigma factor RpoDchromosome CDS755432 1893 + 0.320127
NA BH0800 N utilization substance protein Achromosome CDS856568 1491 + 0.331992
NA BH0394 transcription antitermination protein NusGchromosome CDS409007 555 - 0.345946
NA BH0388 DNA-directed RNA polymerase beta' chainchromosome CDS399201 4134 - 0.335027
NA BH0107 N utilization substance protein Bchromosome CDS105153 441 - 0.290249
NA BH0693 hypothetical proteinchromosome CDS740382 1209 + 0.311001
NA BH0347 fibronectin-binding proteinchromosome CDS358858 1416 + 0.264124
NA BH0831 hypothetical proteinchromosome CDS894500 951 + 0.314406
NA BH0705 ribonuclease IIIchromosome CDS748006 732 + 0.326503
NA BH0731 chromosome partitioning protein ParBchromosome CDS778472 393 - 0.236641
NA BH0581 ATP-dependent DNA helicase RecGchromosome CDS606514 2064 + 0.305717
NA BH0132 transcription elongation factor GreAchromosome CDS128102 2706 - 0.292683
NA BH0355 CarD-like transcriptional regulatorchromosome CDS368457 486 - 0.294239
NA BH0527 Bvg accessory factorchromosome CDS543984 798 + 0.299499
NA BH0771 RNA polymerase sigma factor RpoSchromosome CDS824015 804 - 0.291045
 
Borrelia recurrentis A1, A1
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BRE_526 Response regulator receiver (CheY) modulated Serine phosphatasechromosome CDS553835 1590 + 0.260377
NA BRE_357 transcription factor, putativechromosome CDS387157 495 - 0.29899
NA BRE_737 uncharacterized conserved proteinchromosome CDS789922 405 - 0.219753
NA BRE_791 uncharacterized conserved proteinchromosome CDS843250 1185 + 0.254008
NA BRE_350 fibronectin/fibrinogen-binding protein, putativechromosome CDS377556 1410 + 0.234752
NA BRE_529 pantothenate kinasechromosome CDS557937 795 + 0.265409
greA BRE_135 transcription elongation factor EFchromosome CDS140341 2703 - 0.267111
mfd BRE_630 transcription-repair coupling factorchromosome CDS669740 3378 - 0.2537
ntrA BRE_452 RNA polymerase sigma-54 factorchromosome CDS489651 1257 - 0.241846
nusA BRE_811 N-utilization substance protein Achromosome CDS867032 1485 + 0.30505
nusB BRE_109 N-utilization substance protein Bchromosome CDS117305 441 - 0.274376
nusG BRE_392 transcription antitermination factorchromosome CDS427719 555 - 0.322523
recG BRE_587 DNA recombinasechromosome CDS619856 2064 + 0.289729
rho BRE_229 transcription termination factorchromosome CDS247435 1545 - 0.299676
rnc BRE_710 ribonuclease IIIchromosome CDS759530 732 + 0.293716
rpoA BRE_508 DNA-directed RNA polymerasechromosome CDS527559 1032 + 0.296512
rpoB BRE_387 DNA-directed RNA polymerase beta chainchromosome CDS422058 3468 - 0.330161
rpoC BRE_386 DNA-directed RNA polymerase beta' chainchromosome CDS417910 4134 - 0.325593
rpoD BRE_718 RNA polymerase sigma-70 factorchromosome CDS766949 1893 + 0.303751
rpoS BRE_778 RNA polymerase sigma factorchromosome CDS834445 804 - 0.274876
spo0J BRE_434 stage 0 sporulation protein Jchromosome CDS469469 783 - 0.261814
spoT BRE_195 guanosine-3,5-bis(diphosphate) 3-pyrophosphohydrolasechromosome CDS206689 2004 + 0.263972
xylR-1 BRE_699 xylose operon regulatory proteinchromosome CDS752345 1209 + 0.287841
 
Borrelia turicatae 91E135, 91E135
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA BT0198 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolasechromosome CDS194175 2004 + 0.28493
NA BT0394 transcription antitermination protein NusGchromosome CDS407678 555 - 0.36036
NA BT0693 xylose repressorchromosome CDS737669 1209 + 0.306865
NA BT0527 Bvg accessory factorchromosome CDS540873 789 + 0.30038
NA BT0107 N utilization substance protein Bchromosome CDS105123 441 - 0.272109
NA BT0347 fibronectin-binding proteinchromosome CDS357499 1410 + 0.256738
NA BT0712 RNA polymerase sigma factor RpoDchromosome CDS752668 1893 + 0.323296
NA BT0522A two-component response regulatorchromosome CDS536814 1584 + 0.267045
NA BT0389 DNA-directed RNA polymerase beta chainchromosome CDS402007 3468 - 0.340542
NA BT0434 probable chromosome partitioning protein ParBchromosome CDS452139 813 - 0.279213
NA BT0705 ribonuclease IIIchromosome CDS745248 735 + 0.307483
NA BT0831 glucokinasechromosome CDS890850 951 + 0.312303
NA BT0623 transcription-repair coupling factorchromosome CDS654783 3369 - 0.277234
NA BT0731 chromosome partitioning protein ParBchromosome CDS775684 405 - 0.234568
NA BT0388 DNA-directed RNA polymerase beta' chainchromosome CDS397859 4134 - 0.342042
NA BT0771 RNA polymerase sigma factor RpoSchromosome CDS820347 804 - 0.293532
NA BT0502 DNA-directed RNA polymerase alpha chainchromosome CDS510426 1035 + 0.31401
NA BT0800 N utilization substance protein Achromosome CDS852902 1488 + 0.330645
NA BT0132 transcription elongation factor GreAchromosome CDS127865 2703 - 0.284499
NA BT0581 ATP-dependent DNA helicase RecGchromosome CDS603541 2070 + 0.296135
NA BT0355 CarD-like transcriptional regulatorchromosome CDS367105 486 - 0.281893
NA BT0230 transcription termination factor Rhochromosome CDS234181 1545 - 0.321683
 
Leptospira biflexa serovar Patoc strain Patoc 1 (Ames), Patoc 1 (Ames)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LBF_1368 Response regulator of a two component regulatory systemchromosome I CDS1490172 684 - 0.464912
NA LBF_2898 Transcriptional regulator, AcrR-familychromosome I CDS3117360 687 + 0.3377
NA LBF_0202 Acetyltransferasechromosome I CDS205016 447 + 0.380313
NA LBF_3015 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS3245411 1977 + 0.388973
NA LBF_0804 Transcriptional regulator, AcrR-familychromosome I CDS854490 621 - 0.394525
NA LBF_3038 Transcriptional regulator, AcrR familychromosome I CDS3270290 621 + 0.331723
NA LBF_1690 Regulator of sigma subunitchromosome I CDS1823958 1518 - 0.381423
NA LBF_2095 RNA polymerase sigma subunitchromosome I CDS2244315 606 - 0.425743
NA LBF_0207 Transcriptional regulator (ArsR family)chromosome I CDS208610 345 - 0.385507
NA LBF_0127 Transcription regulatorchromosome I CDS131615 888 + 0.413288
NA LBF_0177 Receiver component of a two-component response regulatorchromosome I CDS180880 672 + 0.388393
NA LBF_3241 Transcriptional regulator, AcrR-familychromosome I CDS3474857 582 - 0.367698
NA LBF_3046 Receiver component of a two-component response regulatorchromosome I CDS3278646 597 + 0.40201
NA LBF_2334 Transcriptional regulator, AcrR-familychromosome I CDS2479263 594 - 0.395623
NA LBF_1715 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS1851226 1821 - 0.41296
NA LBF_2359 Transcriptional regulator, AcrR-familychromosome I CDS2510195 669 + 0.41704
NA LBF_0233 Transcriptional regulatorchromosome I CDS233887 954 - 0.390985
NA LBF_0286 Transcriptional regulator, AcrR-familychromosome I CDS296209 579 - 0.374784
NA LBF_2187 Hypothetical proteinchromosome I CDS2330964 318 + 0.301887
NA LBF_3262 Transcriptional regulatorchromosome I CDS3503759 567 - 0.373898
NA LBF_2429 Transcriptional regulator, AraC familychromosome I CDS2595610 1593 - 0.355304
NA LBF_0203 Transcriptional regulator, AcrR-familychromosome I CDS205556 633 - 0.436019
NA LBF_1190 Transcriptional regulator, ArsR familychromosome I CDS1296207 363 - 0.418733
NA LBF_4001 ParB-like proteinchromosome II CDS810 822 + 0.420925
NA LBF_1008 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS1087532 1926 - 0.373832
NA LBF_2609 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS2795260 2085 - 0.361631
NA LBF_2951 Hypothetical proteinchromosome I CDS3176770 816 + 0.447304
NA LBF_2931 Transcriptional regulator, AcrR-familychromosome I CDS3159872 624 + 0.43109
NA LBF_0863 Transcriptional regulator, AcrR-familychromosome I CDS922174 642 - 0.433022
NA LBF_1734 Transcriptional regulator, marR familychromosome I CDS1870994 462 - 0.393939
NA LBF_1871 Serine phosphatase, regulator of sigma subunitchromosome I CDS2019615 1128 - 0.382092
NA LBF_1402 Transcriptional regulator, MocR familychromosome I CDS1522648 1194 + 0.404523
NA LBF_2736 Conserved hypothetical proteinchromosome I CDS2934312 483 - 0.395445
NA LBF_1176 Transcriptional regulator, AraC familychromosome I CDS1278877 1425 - 0.353684
NA LBF_1323 Transcriptional regulatorchromosome I CDS1439546 465 + 0.354839
NA LBF_3294 Transcription antiterminatorchromosome I CDS3538266 540 + 0.368519
NA LBF_2836 Transcriptional regulator, AraC familychromosome I CDS3040682 1107 - 0.330623
NA LBF_1401 Transcriptional regulator, MocR-familychromosome I CDS1521178 1404 - 0.361823
NA LBF_3307 Transcriptional regulator, AcrR-familychromosome I CDS3551979 660 + 0.416667
NA LBF_0411 Transcriptional regulator, ArsR familychromosome I CDS428813 345 - 0.371015
NA LBF_2943 Transcriptional regulator, AcrR-familychromosome I CDS3169445 723 - 0.445367
NA LBF_4146 Response regulatorchromosome II CDS147696 1191 + 0.36272
NA LBF_2172 SoxR-related transcriptional regulatorchromosome I CDS2319296 384 + 0.283854
NA LBF_5001 ParB-like proteinp74 CDS878 879 + 0.358362
NA LBF_1465 Transcriptional regulator, marR familychromosome I CDS1588902 471 + 0.426752
NA LBF_0856 Acetyltransferasechromosome I CDS915691 474 - 0.407173
NA LBF_0296 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS304611 1962 - 0.348624
NA LBF_2712 Transcriptional regulator, AraC familychromosome I CDS2905551 1089 + 0.325069
NA LBF_4052 RNA polymerase sigma subunitchromosome II CDS50639 525 + 0.36381
NA LBF_0690 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS727736 1704 - 0.411385
NA LBF_0165 Conserved hypothetical proteinchromosome I CDS169097 1122 - 0.437611
NA LBF_1179 Transcriptional regulator, LysR familychromosome I CDS1284125 903 - 0.365449
NA LBF_2928 Transcriptional regulator, AraC familychromosome I CDS3155238 1569 - 0.354366
NA LBF_2884 Conserved hypothetical proteinchromosome I CDS3099824 204 + 0.465686
NA LBF_3118 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS3350143 2370 + 0.328692
NA LBF_2401 Transcriptional regulator, AcrR-familychromosome I CDS2564320 663 - 0.3454
NA LBF_2770 Transcriptional regulator, ArsR familychromosome I CDS2973380 342 + 0.391813
NA LBF_0854 Transcriptional regulator, AcrR-familychromosome I CDS913114 702 + 0.371795
NA LBF_2892 Transcriptional regulator, AraC-relatedchromosome I CDS3111132 897 - 0.370123
NA LBF_2907 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS3133192 1926 + 0.34839
NA LBF_5009 Serine phosphatase RsbU, regulator of sigma subunitp74 CDS5608 1878 + 0.35836
NA LBF_2449 Receiver component of a two-component response regulatorchromosome I CDS2619542 639 + 0.341158
NA LBF_0315 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS328528 1986 + 0.380161
NA LBF_0933 TenA-related transcription activatorchromosome I CDS1008297 696 + 0.462644
NA LBF_1977 acetyltransferasechromosome I CDS2116923 462 - 0.320346
NA LBF_0604 Response regulatorchromosome I CDS637171 519 - 0.371869
NA LBF_2409 Transcriptional regulator, AcrR-familychromosome I CDS2572539 663 - 0.386124
NA LBF_4038 Transcriptional regulator, AcrR-familychromosome II CDS37690 642 + 0.376947
NA LBF_2734 Superfamily II DNA and RNA helicasechromosome I CDS2927765 1416 - 0.410311
NA LBF_1493 Transcriptional regulatorchromosome I CDS1616801 420 + 0.359524
NA LBF_2372 Transcription activator, AraC familychromosome I CDS2525667 714 - 0.341737
NA LBF_1366 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS1487609 1737 + 0.388025
NA LBF_2906 Transcriptional regulatorchromosome I CDS3132184 918 - 0.35512
NA LBF_2408 Transcriptional regulator, AcrR-familychromosome I CDS2571881 654 + 0.383792
NA LBF_2653 Hypothetical proteinchromosome I CDS2837190 813 - 0.399754
NA LBF_3231 Transcriptional regulator, ArsR familychromosome I CDS3460304 363 - 0.410468
NA LBF_2714 RNA-binding proteinchromosome I CDS2907135 264 - 0.340909
NA LBF_2413 AraC-family transcriptional regulatorchromosome I CDS2578902 816 - 0.333333
NA LBF_2270 Receiver component of a two-component response regulatorchromosome I CDS2415645 621 + 0.460548
NA LBF_0100 Transcriptional regulator, AcrR-familychromosome I CDS105534 579 - 0.367876
NA LBF_1549 Acetyltransferasechromosome I CDS1682011 456 + 0.390351
NA LBF_5022 Response regulatorp74 CDS27580 1125 + 0.389333
NA LBF_1524 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS1650995 2748 + 0.396652
NA LBF_3322 DNA/RNA helicase Superfamily IIchromosome I CDS3567728 2847 + 0.361433
NA LBF_0094 Response regulatorchromosome I CDS99395 930 + 0.376344
NA LBF_2594 Transcriptional regulatorchromosome I CDS2781593 582 - 0.405498
NA LBF_1063 Transcriptional regulatorchromosome I CDS1154584 573 + 0.34555
NA LBF_2387 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS2549373 1890 - 0.336508
NA LBF_2778 Acetyltransferasechromosome I CDS2980954 471 - 0.397028
NA LBF_0386 Transcriptional regulatorchromosome I CDS402104 813 - 0.316113
NA LBF_5042 Transcriptional regulator, AcrR-familyp74 CDS59199 561 - 0.351159
NA LBF_4230 Transcriptional regulator, ArsR familychromosome II CDS233265 324 + 0.441358
NA LBF_3114 Response regulatorchromosome I CDS3345644 675 + 0.423704
NA LBF_0546 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS568800 1962 - 0.362385
NA LBF_1931 Transcriptional regulator, ArsR familychromosome I CDS2064807 300 + 0.36
NA LBF_0068 Transcriptional regulatorchromosome I CDS72178 462 - 0.402597
NA LBF_2786 Transcriptional regulator, ArsR familychromosome I CDS2985853 351 - 0.441595
NA LBF_2657 SoxR-related transcriptional regulatorchromosome I CDS2840976 393 + 0.37659
NA LBF_0893 Sigma factor regulatory proteinchromosome I CDS963889 1368 + 0.364035
NA LBF_3164 Response regulatorchromosome I CDS3397782 366 + 0.382514
NA LBF_0119 Transcriptional regulator, AcrR-familychromosome I CDS126031 597 - 0.40201
NA LBF_1105 Transcriptional regulator, marR familychromosome I CDS1199852 459 + 0.379085
NA LBF_1826 RNA-binding proteinchromosome I CDS1979616 270 - 0.381481
NA LBF_1188 RNA polymerase sigma factorchromosome I CDS1293345 1227 + 0.341483
NA LBF_2320 Transcriptional regulatorchromosome I CDS2466930 639 - 0.380282
NA LBF_3111 RNA polymerase sigma subunitchromosome I CDS3344357 489 + 0.380368
NA LBF_5004 Transcriptional regulator, AcrR-familyp74 CDS3114 588 - 0.358844
NA LBF_0359 Transcriptional regulatorchromosome I CDS378724 300 - 0.323333
NA LBF_4025 ParB-like proteinchromosome II CDS27376 711 + 0.357243
NA LBF_1442 Transcriptional regulator/sugar kinasechromosome I CDS1562168 897 - 0.411371
NA LBF_2130 SoxR-related transcriptional regulatorchromosome I CDS2281589 384 + 0.283854
NA LBF_1080 Transcriptional regulatorchromosome I CDS1174691 624 - 0.423077
NA LBF_4088 Receiver component of a two-component response regulatorchromosome II CDS88766 657 + 0.401826
NA LBF_0732 Transcriptional regulatorchromosome I CDS778284 1119 - 0.379803
NA LBF_1390 Transcriptional regulator, AraC familychromosome I CDS1513097 825 + 0.364848
NA LBF_2891 RNA polymerase sigma subunitchromosome I CDS3110292 873 + 0.37457
NA LBF_3358 ParB-like proteinchromosome I CDS3600359 897 - 0.400223
NA LBF_4138 RNA polymerase sigma subunitchromosome II CDS138771 519 - 0.400771
NA LBF_1988 Transcriptional regulatorchromosome I CDS2127545 339 - 0.383481
NA LBF_2182 Transcriptional regulatorchromosome I CDS2328778 246 + 0.313008
NA LBF_3233 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS3462298 2022 - 0.347676
NA LBF_1496 Response regulator with CheY-like receiver and HD-GYP domainchromosome I CDS1622081 1002 + 0.373253
NA LBF_2729 Transcriptional regulator, AraC familychromosome I CDS2921654 1098 - 0.324226
NA LBF_2438 Response regulatorchromosome I CDS2605154 768 - 0.321615
NA LBF_0770 Transcriptional regulator, marR familychromosome I CDS820997 438 + 0.381279
NA LBF_0383 Sensor protein of a two-component response regulatorchromosome I CDS398528 678 + 0.383481
NA LBF_4098 RNA polymerase sigma subunitchromosome II CDS98281 846 - 0.416076
NA LBF_2717 Conserved hypothetical proteinchromosome I CDS2911140 1149 + 0.318538
NA LBF_4166 Serine phosphatase RsbU, regulator of sigma subunitchromosome II CDS167732 1746 + 0.416953
NA LBF_2197 transcription regulator, SoxR-relatedchromosome I CDS2337878 393 + 0.284987
NA LBF_3159 Transcriptional regulatorchromosome I CDS3393915 792 - 0.381313
NA LBF_3305 Hypothetical proteinchromosome I CDS3550381 489 + 0.384458
NA LBF_3205 Transcriptional regulator, AcrR-familychromosome I CDS3441324 591 + 0.409475
NA LBF_2908 Response regulatorchromosome I CDS3135126 738 + 0.359079
NA LBF_0355 Acetyltransferasechromosome I CDS376055 450 - 0.342222
NA LBF_4225 Response regulatorchromosome II CDS231049 726 + 0.406336
NA LBF_1034 RNA polymerase sigma subunitchromosome I CDS1117623 954 - 0.360587
NA LBF_1488 RNA binding proteinchromosome I CDS1612872 369 - 0.495935
NA LBF_0338 ATP-dependent DNA helicase, recG-relatedchromosome I CDS353503 2061 + 0.388646
NA LBF_3180 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS3414724 1953 - 0.332821
NA LBF_2698 Transcriptional regulator, marR familychromosome I CDS2889882 438 - 0.363014
NA LBF_2161 transcriptional regulatorchromosome I CDS2310756 1413 + 0.326964
NA LBF_2997 Transcriptional regulator, AcrR-familychromosome I CDS3231195 645 + 0.462016
NA LBF_1664 Transcriptional regulatorchromosome I CDS1793480 414 + 0.39372
NA LBF_2156 Hypothetical proteinchromosome I CDS2307442 282 + 0.265957
NA LBF_1049 Response regulator of the LytR/AlgR familychromosome I CDS1142501 705 + 0.33617
NA LBF_2082 Superfamily II DNA and RNA helicasechromosome I CDS2233540 1590 - 0.433962
NA LBF_5006 Transcriptional regulator, AcrR-familyp74 CDS4276 609 - 0.374384
NA LBF_2544 Transcriptional regulator, AraC familychromosome I CDS2725522 870 + 0.35977
NA LBF_2922 Transcriptional regulator, AcrR-familychromosome I CDS3147677 627 - 0.341308
NA LBF_2558 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS2740895 1245 - 0.362249
NA LBF_0720 Transcriptional regulator, AcrR-familychromosome I CDS764858 657 + 0.398782
NA LBF_0593 Transcription Regulatorchromosome I CDS625998 549 + 0.326047
NA LBF_2716 Transcriptional regulator, AcrR-familychromosome I CDS2910384 567 - 0.372134
NA LBF_0912 RNA polymerase sigma subunitchromosome I CDS983628 801 + 0.421973
NA LBF_3018 RNA-binding proteinchromosome I CDS3249934 264 + 0.378788
NA LBF_1027 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS1108435 1761 - 0.396366
greA LBF_2266 greA transcription elongation factor-related proteinchromosome I CDS2409915 2766 - 0.39154
greA-1 LBF_2700 Transcription elongation factorchromosome I CDS2890929 417 + 0.326139
hrcA LBF_3267 Heat-inducible transcriptional repressor, HrcAchromosome I CDS3509004 1032 - 0.416667
lexA LBF_1262 Repressor lexAchromosome I CDS1378327 609 + 0.474548
mfd LBF_1770 Transcription-repair coupling factorchromosome I CDS1911714 3423 - 0.378907
nusA LBF_1471 Transcription elongation factorchromosome I CDS1593655 1401 + 0.460385
nusB LBF_2085 Transcription antitermination proteinchromosome I CDS2238070 423 - 0.434988
nusG LBF_1925 Transcription antiterminatorchromosome I CDS2061965 555 - 0.412613
paiB LBF_0354 PaiB transcriptional regulatorchromosome I CDS375416 612 - 0.379085
rho LBF_0998 Transcription termination factor Rhochromosome I CDS1079274 1404 + 0.451567
rnc LBF_2504 Ribonuclease IIIchromosome I CDS2678201 729 - 0.411523
rpoA LBF_1886 DNA-directed RNA polymerase, alpha subunitchromosome I CDS2033501 978 - 0.392638
rpoB LBF_1920 DNA-directed RNA polymerase, beta subunitchromosome I CDS2056005 3687 - 0.442365
rpoC LBF_1919 DNA-directed RNA polymerase, beta subunitchromosome I CDS2051689 4302 - 0.451883
rpoD LBF_1515 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)chromosome I CDS1639265 1773 + 0.406091
rpoE LBF_2055 RNA polymerase sigma subunitchromosome I CDS2209517 570 + 0.412281
rpoN LBF_1600 DNA-directed RNA polymerase sigma-54 subunitchromosome I CDS1730481 1422 + 0.376231
rsbU-3 LBF_0517 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS537772 1284 + 0.363707
rsbU-4 LBF_2378 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS2533674 1968 + 0.341972
rsbU-7 LBF_1752 Serine phosphatase RsbU, regulator of sigma subunitchromosome I CDS1889265 1914 + 0.325496
spoT LBF_2258 GTP pyrophosphokinasechromosome I CDS2400949 2055 - 0.39854
srmB LBF_4201 ATP-dependent RNA helicase (superfamily II)chromosome II CDS209180 1590 + 0.438365
vacB LBF_0022 Exoribonuclease Rchromosome I CDS23907 2193 - 0.367533
 
Leptospira biflexa serovar Patoc strain Patoc 1 (Paris), Patoc 1 (Paris)
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LEPBI_I0889 Putative acyltransferasechromosome I CDS909988 474 - 0.407173
NA LEPBI_I1443 Putative transcriptional regulatorchromosome I CDS1507708 825 + 0.364848
NA LEPBI_I2834 Hypothetical proteinchromosome I CDS2925926 483 - 0.395445
NA LEPBI_II0242 Putative transcriptional regulatorchromosome II CDS232954 324 + 0.441358
NA LEPBI_I2474 Putative transcriptional regulator, TetR familychromosome I CDS2557463 663 - 0.3454
NA LEPBI_I0239 Conserved hypothetical proteinchromosome I CDS229845 954 - 0.390985
NA LEPBI_I1042 Putative phosphoserine phosphatase RsbP; putative membrane protein; putative signal peptidechromosome I CDS1082144 1926 - 0.373832
NA LEPBI_I3106 Putative transcriptional regulator, TetR familychromosome I CDS3222818 645 + 0.462016
NA LEPBI_I3272 Conserved hypothetical proteinchromosome I CDS3385538 792 - 0.381313
NA LEPBI_II0039 Hypothetical proteinchromosome II CDS37719 642 + 0.376947
NA LEPBI_I3002 Putative transcriptional regulator, TetR familychromosome I CDS3108983 687 + 0.3377
NA LEPBI_I1147 Putative transcriptional regulator, MarR familychromosome I CDS1194464 459 + 0.379085
NA LEPBI_I2450 Putative serine phosphatase RsbU regulator; putative membrane protein; putative signal peptidechromosome I CDS2526817 1968 + 0.341972
NA LEPBI_I2676 Transcriptional regulator, CarD familychromosome I CDS2773207 582 - 0.405498
NA LEPBI_I2799 Hypothetical protein; putative membrane proteinchromosome I CDS2897165 1089 + 0.325069
NA LEPBI_I2786 Putative transcription elongation factorchromosome I CDS2882543 417 + 0.326139
NA LEPBI_I3124 Putative phosphate transporter; putative membrane protein; putative signal peptidechromosome I CDS3237034 1977 + 0.388973
NA LEPBI_I0628 Putative transcriptional regulator, LuxR familychromosome I CDS631601 519 - 0.371869
NA LEPBI_p0010 Putative phosphoserine phosphatase; putative membrane proteinp74 CDS5836 1878 + 0.35836
NA LEPBI_II0171 Sigma factor SigB regulation protein RsbU; putative phosphoserine phosphatasechromosome II CDS167760 1746 + 0.416953
NA LEPBI_I1222 Putative transcriptional factor; putative membrane proteinchromosome I CDS1273489 1317 - 0.350797
NA LEPBI_I0370 Putative transcriptional regulator, PadR familychromosome I CDS373154 300 - 0.323333
NA LEPBI_II0053 Putative RNA polymerase ECF-type sigma factorchromosome II CDS50668 525 + 0.36381
NA LEPBI_I1070 Putative RNA polymerase sigma-70-like factorchromosome I CDS1112235 954 - 0.360587
NA LEPBI_I3223 Putative RNA polymerase sigma factorchromosome I CDS3335980 489 + 0.380368
NA LEPBI_I2150 Putative RNA polymerase sigma-70 factorchromosome I CDS2238925 579 - 0.426598
NA LEPBI_I1926 Putative two-component regulatorchromosome I CDS2014226 1128 - 0.382092
NA LEPBI_I1121 Putative transcriptional regulatorchromosome I CDS1169303 624 - 0.423077
NA LEPBI_I3048 Putative transcriptional regulator, TetR familychromosome I CDS3161068 576 - 0.451389
NA LEPBI_I2932 RNA polymerase ECF-type sigma factorchromosome I CDS3028611 711 - 0.393812
NA LEPBI_I0094 Putative two-component response regulatorchromosome I CDS95348 930 + 0.376344
NA LEPBI_I0366 Putative acetyltransferasechromosome I CDS370485 450 - 0.342222
NA LEPBI_I0743 Putative transcriptional regulatorchromosome I CDS759288 657 + 0.398782
NA LEPBI_I0617 Putative transcriptional regulator, PadR familychromosome I CDS620428 549 + 0.326047
NA LEPBI_I1549 Two-component response regulatorchromosome I CDS1616701 1002 + 0.373253
NA LEPBI_I0208 Putative HTH-type transcriptional regulator, TetR familychromosome I CDS201514 633 - 0.436019
NA LEPBI_I2247 Putative helix-turn-helix protein CopGchromosome I CDS2323392 246 + 0.313008
NA LEPBI_I2526 Putative two-component response regulatorchromosome I CDS2612685 639 + 0.341158
NA LEPBI_I2931 RNA polymerase ECF-type sigma factorchromosome I CDS3028403 201 - 0.447761
NA LEPBI_I2218 Putative transcriptional regulatorchromosome I CDS2302056 282 + 0.265957
NA LEPBI_I0565 Putative phosphoserine phosphatase RsbU (Sigma factor sigB regulation protein RsbU)chromosome I CDS563230 1962 - 0.362385
NA LEPBI_I3036 Putative transcriptional regulator, TetR familychromosome I CDS3151495 624 + 0.43109
NA LEPBI_I0430 Putative transcriptional regulator, ArsR familychromosome I CDS423243 318 - 0.367925
NA LEPBI_II0143 Putative RNA polymerase ECF-type sigma factorchromosome II CDS138800 519 - 0.400771
NA LEPBI_I1546 Hypothetical proteinchromosome I CDS1611421 420 + 0.359524
NA LEPBI_I3010 Putative bacterial regulatory protein, LysR familychromosome I CDS3123807 918 - 0.35512
NA LEPBI_I0068 HTH-type transcriptional regulator, MarR familychromosome I CDS68131 462 - 0.402597
NA LEPBI_I0835 Putative transcriptional regulator, TetR familychromosome I CDS848787 621 - 0.394525
NA LEPBI_I3320 Putative transcriptional regulator, TetR familychromosome I CDS3432947 591 + 0.409475
NA LEPBI_I3044 Hypothetical protein; putative membrane proteinchromosome I CDS3158022 1221 + 0.421785
NA LEPBI_I2030 Hypothetical proteinchromosome I CDS2111534 462 - 0.320346
NA LEPBI_I3226 Putative response regulator receiver, transcriptional regulatory protein (C-terminal)chromosome I CDS3337267 675 + 0.423704
NA LEPBI_I3424 Putative transcriptional regulatorchromosome I CDS3543629 660 + 0.416667
NA LEPBI_I0212 Putative transcriptional regulator, ArsR familychromosome I CDS204568 345 - 0.385507
NA LEPBI_I2223 Putative ATP-binding proteinchromosome I CDS2305370 1413 + 0.326964
NA LEPBI_II0026 Putative chromosome partitioning protein ParBchromosome II CDS27405 711 + 0.357243
NA LEPBI_I0295 Putative transcriptional regulator, TetR familychromosome I CDS290639 579 - 0.374784
NA LEPBI_I3033 Putative transcriptional regulator, AraC family; putative membrane proteinchromosome I CDS3146861 1674 - 0.358423
NA LEPBI_I1575 Putative phosphodiesterase or phosphatasechromosome I CDS1645608 2748 + 0.396652
NA LEPBI_I2639 Putative serine phosphatasechromosome I CDS2732509 1245 - 0.362249
NA LEPBI_II0002 Putative chromosome partitioning protein ParBchromosome II CDS839 822 + 0.420925
NA LEPBI_I3355 Putative transcriptional regulator, TetR familychromosome I CDS3466480 582 - 0.367698
NA LEPBI_p0023 Putative transcription regulator; putative membrane proteinp74 CDS27807 1125 + 0.389333
NA LEPBI_I1427 Putative transcriptional regulatorchromosome I CDS1489906 789 - 0.420786
NA LEPBI_I0398 Putative transcriptional regulator (DNA-binding domain)chromosome I CDS396534 813 - 0.316113
NA LEPBI_I3410 Putative transcription antitermination protein nusGchromosome I CDS3529916 540 + 0.368519
NA LEPBI_I2482 Putative transcriptional regulator, TetR familychromosome I CDS2565024 654 + 0.383792
NA LEPBI_I2444 Hypothetical proteinchromosome I CDS2518810 714 - 0.341737
NA LEPBI_I3347 Putative phosphoserine phosphatase; putative membrane protein; putative signal peptidechromosome I CDS3453921 2022 - 0.347676
NA LEPBI_I1454 Putative aspartate aminotransferase (Transaminase A; ASPAT)chromosome I CDS1517259 1194 + 0.404523
NA LEPBI_I3376 Conserved hypothetical proteinchromosome I CDS3495382 567 - 0.373898
NA LEPBI_I0713 Putative phosphoserine phosphatase; putative membrane proteinchromosome I CDS722166 1704 - 0.411385
NA LEPBI_p0047 Putative transcriptional regulator, TetR familyp74 CDS59426 561 - 0.351159
NA LEPBI_I1743 Putative sigma factor sigB regulation protein RsbU; putative membrane protein; putative signal peptidechromosome I CDS1818570 1518 - 0.381423
NA LEPBI_I3422 Hypothetical proteinchromosome I CDS3542031 489 + 0.384458
NA LEPBI_I1422 Putative two-component response regulatorchromosome I CDS1484784 684 - 0.464912
NA LEPBI_I2995 Hypothetical proteinchromosome I CDS3101915 873 + 0.37457
NA LEPBI_I0536 Putative phosphoserine phosphatasechromosome I CDS532202 1284 + 0.363707
NA LEPBI_I2403 Putative transcriptional regulatorchromosome I CDS2472406 594 - 0.395623
NA LEPBI_I2252 Conserved hypothetical proteinchromosome I CDS2325629 267 + 0.303371
NA LEPBI_p0005 Putative transcriptional regulator, TetR-familyp74 CDS3342 588 - 0.358844
NA LEPBI_I2136 ATP-dependent RNA helicasechromosome I CDS2228150 1590 - 0.433962
NA LEPBI_I1104 Putative transcriptional regulator, TetR familychromosome I CDS1149196 573 + 0.34555
NA LEPBI_I1805 Hypothetical protein; putative membrane proteinchromosome I CDS1883877 1914 + 0.325496
NA LEPBI_I3230 Conserved hypothetical protein; putative membrane proteinchromosome I CDS3341766 2370 + 0.328692
NA LEPBI_II0151 Putative two-component response regulatorchromosome II CDS147725 1191 + 0.36272
NA LEPBI_I1420 Putative phosphoserine phosphatasechromosome I CDS1482221 1737 + 0.388025
NA LEPBI_I1600 Putative acetyltransferasechromosome I CDS1676624 456 + 0.390351
NA LEPBI_I2935 Hypothetical protein with putative DNA-binding domain; putative membrane proteinchromosome I CDS3032296 1107 - 0.330623
NA LEPBI_I2339 Putative two-component regulatory response regulator, LuxR familychromosome I CDS2410314 621 + 0.460548
NA LEPBI_I1228 Putative transcriptional regulator, LysR familychromosome I CDS1278737 903 - 0.365449
NA LEPBI_I0207 Putative acetyltransferasechromosome I CDS200974 447 + 0.380313
NA LEPBI_I0170 Conserved hypothetical proteinchromosome I CDS165055 1107 - 0.438121
NA LEPBI_I1062 Putative sigma factor sigB regulation protein RsbUchromosome I CDS1103047 1761 - 0.396366
NA LEPBI_I1787 Putative transcriptional regulator, MarR familychromosome I CDS1865606 462 - 0.393939
NA LEPBI_I0365 Putative negative transcriptional regulatorchromosome I CDS369846 612 - 0.379085
NA LEPBI_I2996 Putative AraC-type transcriptional regulatorchromosome I CDS3102755 897 - 0.370123
NA LEPBI_I1087 Putative two-component response regulatorchromosome I CDS1137113 705 + 0.33617
NA LEPBI_I1716 Putative transcriptional regulatorchromosome I CDS1788092 414 + 0.39372
NA LEPBI_I2624 Putative transcriptional regulator, AraC-typechromosome I CDS2717136 870 + 0.35977
NA LEPBI_p0007 Putative transcriptional regulatorp74 CDS4504 642 - 0.376947
NA LEPBI_I0305 Putative phosphoserine phosphatase; putative membrane proteinchromosome I CDS299041 1962 - 0.348624
NA LEPBI_I0755 Putative transcriptional regulator, AraC family; putative membrane proteinchromosome I CDS772714 1119 - 0.379803
NA LEPBI_I0926 Putative phosphoserine phosphatase RsbU (Sigma factor SigB regulation protein RsbU)chromosome I CDS958186 1368 + 0.364035
NA LEPBI_I0182 Putative response regulator, LuxR familychromosome I CDS176838 672 + 0.388393
NA LEPBI_I2109 Putative RNA polymerase sigma-E factorchromosome I CDS2204128 570 + 0.412281
NA LEPBI_I3011 Putative phosphoserine phosphatase; putative membrane protein; putative signal peptidechromosome I CDS3124815 1926 + 0.34839
NA LEPBI_II0090 Putative response regulatory proteinchromosome II CDS88795 657 + 0.401826
NA LEPBI_I3045 Hypothetical proteinchromosome I CDS3159247 288 + 0.395833
NA LEPBI_I1768 Hypothetical protein with TRP repeatschromosome I CDS1845838 1821 - 0.41296
NA LEPBI_I0798 Putative transcriptional regulator, MarR familychromosome I CDS815330 402 + 0.383085
NA LEPBI_I2191 Putative transcriptional regulator, MerR familychromosome I CDS2276203 384 + 0.283854
NA LEPBI_I2233 Putative transcriptional regulator, MerR familychromosome I CDS2313910 384 + 0.283854
NA LEPBI_I0324 Putative phosphoserine phosphatasechromosome I CDS322958 1986 + 0.380161
NA LEPBI_I2459 Putative serine phosphatase RsbU; putative membrane protein; putative signal peptidechromosome I CDS2542516 1890 - 0.336508
NA LEPBI_I2504 Putative transcriptional regulator; putative membrane proteinchromosome I CDS2588753 1260 - 0.344444
NA LEPBI_I0118 Conserved hypothetical proteinchromosome I CDS121989 597 - 0.40201
NA LEPBI_II0101 Hypothetical proteinchromosome II CDS98310 846 - 0.416076
NA LEPBI_I1376 Putative transcriptional regulatorchromosome I CDS1434158 465 + 0.354839
NA LEPBI_I2784 Putative transcriptional regulator, MarR familychromosome I CDS2881496 438 - 0.363014
NA LEPBI_p0002 Putative chromosome partitioning protein ParBp74 CDS1106 879 + 0.358362
NA LEPBI_I1238 Conserved hypothetical proteinchromosome I CDS1287957 1227 + 0.341483
NA LEPBI_I1453 Putative bifunctional protein: transcriptional regulator/amino transferasechromosome I CDS1515789 1428 - 0.361345
NA LEPBI_I3056 Hypothetical protein; putative signal peptidechromosome I CDS3168393 816 + 0.447304
NA LEPBI_I2737 Putative transcriptional regulator, AraC familychromosome I CDS2828804 813 - 0.399754
NA LEPBI_I2515 Putative two-component response regulatorchromosome I CDS2598297 768 - 0.321615
NA LEPBI_I2690 Putative phosphoserine phosphatase; putative membrane proteinchromosome I CDS2786874 2085 - 0.361631
NA LEPBI_I3155 Putative regulatory proteinchromosome I CDS3270269 597 + 0.40201
NA LEPBI_I0887 Putative transcriptional regulator, TetR familychromosome I CDS907411 702 + 0.371795
NA LEPBI_I2488 Putative transcriptional regulatorchromosome I CDS2572045 816 - 0.333333
NA LEPBI_I2879 Putative acetyltransferasechromosome I CDS2972568 471 - 0.397028
NA LEPBI_I2041 Putative transcriptional regulatorchromosome I CDS2122156 339 - 0.383481
NA LEPBI_I2987 Conserved hypothetical proteinchromosome I CDS3091447 204 + 0.465686
NA LEPBI_I1241 Putative transcriptional regulator, ArsR familychromosome I CDS1290819 363 - 0.418733
NA LEPBI_I3012 Putative two-component response regulatorchromosome I CDS3126749 738 + 0.359079
NA LEPBI_I0419 Hypothetical proteinchromosome I CDS413678 123 - 0.325203
NA LEPBI_I2429 Putative transcriptional regulator, TetR familychromosome I CDS2503338 669 + 0.41704
NA LEPBI_I3027 Putative transcriptional regulator, TetR familychromosome I CDS3139300 627 - 0.341308
NA LEPBI_I0967 Putative transcriptional activator, TenA familychromosome I CDS1002909 696 + 0.462644
NA LEPBI_I2806 Hypothetical protein; putative membrane proteinchromosome I CDS2902754 1149 + 0.318538
NA LEPBI_II0237 Two-component response regulatorchromosome II CDS230738 726 + 0.406336
NA LEPBI_I1458 Putative protein phosphatase; putative membrane protein; putative signal peptidechromosome I CDS1519191 2085 - 0.377938
NA LEPBI_I0895 Putative transcriptional regulator, TetR familychromosome I CDS916471 693 - 0.431457
NA LEPBI_I3277 Putative response receiverchromosome I CDS3389405 366 + 0.382514
NA LEPBI_I0127 Putative HTH-type transcriptional regulatorchromosome I CDS127573 888 + 0.413288
NA LEPBI_I1541 Putative glycine-rich RNA binding proteinchromosome I CDS1607492 369 - 0.495935
NA LEPBI_I0486 Putative two-component response regulatorchromosome I CDS480329 96 - 0.322917
NA LEPBI_I2820 Hypothetical protein; putative membrane proteinchromosome I CDS2913268 1098 - 0.324226
NA LEPBI_Ia2473 Putative regulator protein, TetR familychromosome I CDS2565682 663 - 0.386124
NA LEPBI_I2260 Putative transcriptional regulator, MerR familychromosome I CDS2332491 393 + 0.284987
NA LEPBI_I3294 Putative protein phosphatase; putative membrane proteinchromosome I CDS3406347 1818 - 0.338284
NA LEPBI_I1518 Putative transcriptional regulatorchromosome I CDS1583522 471 + 0.426752
NA LEPBI_I1981 Putative transcriptional regulator, ArsR familychromosome I CDS2059418 300 + 0.36
NA LEPBI_I3147 Putative transcriptional regulator, TetR familychromosome I CDS3261913 621 + 0.331723
NA LEPBI_I0100 Transcriptional regulator, TetR familychromosome I CDS101487 579 - 0.367876
NA LEPBI_I2805 Putative transcriptional regulatorchromosome I CDS2901998 567 - 0.372134
arsR1 LEPBI_I2871 Arsenical resistance operon repressorchromosome I CDS2965000 336 + 0.389881
arsR2 LEPBI_I2885 Arsenical resistance operon repressorchromosome I CDS2977467 351 - 0.441595
arsR3 LEPBI_I3345 Arsenical resistance operon repressor, transcriptional regulator, ArsR familychromosome I CDS3451927 363 - 0.410468
creB LEPBI_I0395 Transcriptional regulatory protein CreBchromosome I CDS392958 678 + 0.383481
cueR LEPBI_I2741 Transcriptional activator/repressor,heavy-metal dependent, MerR familychromosome I CDS2832590 393 + 0.37659
deaD LEPBI_II0208 ATP-dependent RNA helicase, DEAD-box family (DeaD)chromosome II CDS209193 1605 + 0.437383
fliA LEPBI_I0946 RNA polymerase sigma factor for flagellar operonchromosome I CDS978240 801 + 0.421973
gclK LEPBI_I1496 Glucokinase (Glucose kinase)chromosome I CDS1556788 897 - 0.411371
greA LEPBI_I2333 Transcriptional elongation factor, GreA/GreB familychromosome I CDS2404562 2766 - 0.39154
hcrA LEPBI_I3381 Heat-inducible transcription repressor HrcAchromosome I CDS3500627 1041 - 0.417867
hepA LEPBI_I3440 ATP-dependent RNA helicasechromosome I CDS3559378 2847 + 0.361433
lexA LEPBI_I1316 LexA repressorchromosome I CDS1372939 609 + 0.474548
mfd LEPBI_I1823 Transcription-repair coupling factor (TRCF; ATP-dependent helicase Mfd)chromosome I CDS1906326 3423 - 0.378907
nusA LEPBI_I1524 N utilization substance protein Achromosome I CDS1588275 1401 + 0.460385
nusB LEPBI_I2139 N utilization substance protein B-like protein (Protein NusB); L factorchromosome I CDS2232680 423 - 0.434988
nusG LEPBI_I1977 Transcription antitermination protein NusGchromosome I CDS2056576 555 - 0.412613
parB LEPBI_I3473 Chromosome partitioning protein ParBchromosome I CDS3592012 897 - 0.400223
rbpA1 LEPBI_I2801 RNA-binding proteinchromosome I CDS2898749 264 - 0.340909
rbpA2 LEPBI_I1881 RNA binding proteinchromosome I CDS1974228 270 - 0.381481
rbpA3 LEPBI_I3127 RNA-binding proteinchromosome I CDS3241557 264 + 0.378788
recG LEPBI_I0349 ATP-dependent DNA helicase RecGchromosome I CDS347933 2061 + 0.388646
rhlE LEPBI_I2827 ATP-dependent RNA helicase RhlEchromosome I CDS2919379 1416 - 0.410311
rho LEPBI_I1032 Transcription termination factor Rhochromosome I CDS1073886 1404 + 0.451567
rnc LEPBI_I2584 Ribonuclease IIIchromosome I CDS2671343 729 - 0.411523
rnr LEPBI_I0020 Ribonuclease Rchromosome I CDS19860 2193 - 0.367533
rpoA LEPBI_I1939 DNA-directed RNA polymerase alpha chainchromosome I CDS2028112 978 - 0.392638
rpoB LEPBI_I1972 DNA-directed RNA polymerase beta chain (RNAP beta subunit; Transcriptase beta chain) (RNA polymerase beta subunit)chromosome I CDS2050616 3687 - 0.442365
rpoC LEPBI_I1971 DNA-directed RNA polymerase beta' chainchromosome I CDS2046300 4302 - 0.451883
rpoD LEPBI_I1567 RNA polymerase sigma factor rpoD (Sigma-70)chromosome I CDS1633878 1773 + 0.406091
rpoN LEPBI_I1650 RNA polymerase sigma-54 factorchromosome I CDS1725094 1422 + 0.376231
scpB LEPBI_I2388 Chromosome segregation and condensation protein ScpBchromosome I CDS2460071 639 - 0.380282
 
Leptospira borgpetersenii serovar Hardjo-bovis JB197, JB197
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LBJ_1805 Transcriptional regulatorchromosome 1 CDS2129131 426 + 0.389671
NA LBJ_1965 Sensor protein of a two-component response regulatorchromosome 1 CDS2312487 669 - 0.427504
NA LBJ_1691 RNA binding proteinchromosome 1 CDS1995411 366 - 0.412568
NA LBJ_1620 RNA polymerase sigma subunitchromosome 1 CDS1907203 801 - 0.405743
NA LBJ_2322 Transcriptional regulator, AcrR-familychromosome 1 CDS2775453 600 - 0.381667
NA LBJ_0157 Conserved hypothetical proteinchromosome 1 CDS192210 390 + 0.353846
NA LBJ_4001 ParB-like proteinchromosome 2 CDS875 846 + 0.353428
NA LBJ_1025 Transcriptional regulator, AcrR-familychromosome 1 CDS1232960 705 + 0.419858
NA LBJ_0307 Serine/threonine kinase with GAF domainchromosome 1 CDS380754 5211 - 0.387642
NA LBJ_0638 RNA polymerase sigma subunitchromosome 1 CDS770856 510 - 0.396078
NA LBJ_0697 Serine phosphatase, regulator of sigma subunitchromosome 1 CDS836402 1131 + 0.432361
NA LBJ_1908 RNA polymerase sigma subunitchromosome 1 CDS2251965 549 - 0.409836
NA LBJ_2576 Superfamily II DNA and RNA helicasechromosome 1 CDS3083440 1650 + 0.424848
NA LBJ_0492 RNA-binding proteinchromosome 1 CDS599475 261 - 0.371648
NA LBJ_0352 Receiver component of a two-component response regulatorchromosome 1 CDS430365 666 - 0.421922
NA LBJ_0931 Transcriptional regulatorchromosome 1 CDS1115974 534 + 0.425094
NA LBJ_1788 Transcriptional regulatorchromosome 1 CDS2109110 306 + 0.343137
NA LBJ_1110 Transcriptional regulatorchromosome 1 CDS1335016 321 + 0.386293
NA LBJ_2042 Transcriptional regulatorchromosome 1 CDS2407180 615 - 0.422764
NA LBJ_0260 Transcriptional regulator, AcrR-familychromosome 1 CDS310358 513 - 0.409357
NA LBJ_1244 Transcriptional regulator, MarR familychromosome 1 CDS1476777 441 - 0.387755
NA LBJ_0233 DNA/RNA helicase Superfamily IIchromosome 1 CDS271379 2856 + 0.398109
NA LBJ_1646 ParB-like proteinchromosome 1 CDS1938307 399 + 0.373434
NA LBJ_2791 Transcriptional regulatorchromosome 1 CDS3309324 546 - 0.408425
NA LBJ_0035 Transcription antiterminatorchromosome 1 CDS44235 540 - 0.344444
NA LBJ_2957 Transcriptional regulator, marR familychromosome 1 CDS3512049 441 - 0.371882
NA LBJ_4013 two component regulatory system response regulatorchromosome 2 CDS14693 693 + 0.445887
NA LBJ_1299 Transcriptional regulator, ArsR familychromosome 1 CDS1540438 300 - 0.393333
NA LBJ_0189 RNA polymerase sigma subunitchromosome 1 CDS225159 600 - 0.365
NA LBJ_0047 RNA polymerase sigma subunitchromosome 1 CDS57533 885 + 0.477966
NA LBJ_1766 Transcriptional regulator, AcrR-familychromosome 1 CDS2080437 552 + 0.38587
NA LBJ_4205 RNA polymerase sigma subunitchromosome 2 CDS235887 522 - 0.386973
NA LBJ_2555 Transcriptional regulator, AcrR-familychromosome 1 CDS3057275 594 - 0.397306
NA LBJ_0997 Acetyltransferasechromosome 1 CDS1195450 498 - 0.417671
NA LBJ_0265 Bi-functional protein, with a transcription regulator domainchromosome 1 CDS319284 795 - 0.431447
NA LBJ_0893 RNA polymerase sigma subunitchromosome 1 CDS1081161 624 + 0.407051
NA LBJ_0766 Receiver component of a two-component response regulatorchromosome 1 CDS923913 702 - 0.413105
NA LBJ_0549 Transcriptional regulator, AcrR-familychromosome 1 CDS661745 615 - 0.406504
NA LBJ_4245 Response regulatorchromosome 2 CDS278362 726 + 0.422865
NA LBJ_2727 Transcriptional regulator, ArsR familychromosome 1 CDS3237440 312 + 0.333333
NA LBJ_1391 Transcriptional regulator, AcrR-familychromosome 1 CDS1655112 579 - 0.378238
NA LBJ_0690 Transcriptional regulator, ArsR familychromosome 1 CDS830388 387 - 0.452196
NA LBJ_2316 Serine phosphatase RsbU, regulator of sigma subunitchromosome 1 CDS2768535 1764 + 0.407596
NA LBJ_0287 Transcriptional regulator, marR familychromosome 1 CDS348405 450 - 0.435556
NA LBJ_0887 Sigma factor regulatory proteinchromosome 1 CDS1075093 1383 + 0.403471
NA LBJ_0099 Transcriptional regulator, AcrR-familychromosome 1 CDS117286 624 - 0.379808
NA LBJ_0491 Transcriptional regulatorchromosome 1 CDS598576 774 + 0.426357
NA LBJ_0182 Serine phosphatase RsbU, regulator of sigma subunitchromosome 1 CDS217120 2397 - 0.365874
NA LBJ_2583 Transcriptional regulatorchromosome 1 CDS3092139 945 + 0.405291
NA LBJ_2523 Transcriptional regulator, PadR familychromosome 1 CDS3016663 351 - 0.393162
NA LBJ_1888 Sigma factor PP2C-like phosphatasechromosome 1 CDS2233114 981 + 0.377166
NA LBJ_0275 Transcriptional regulator, AcrR-familychromosome 1 CDS333969 594 - 0.383838
NA LBJ_2735 Receiver component of a response regulatorchromosome 1 CDS3245771 678 - 0.356932
NA LBJ_1787 Transcriptional regulator, HTH domainchromosome 1 CDS2108010 345 + 0.333333
NA LBJ_4095 Serine phosphatase RsbU, regulator of sigma subunitchromosome 2 CDS109141 1749 - 0.408805
NA LBJ_0436 Transcriptional regulatorchromosome 1 CDS528881 549 + 0.409836
NA LBJ_2781 RNA polymerase sigma subunitchromosome 1 CDS3294825 906 - 0.36755
NA LBJ_4021 ParB-like proteinchromosome 2 CDS23518 708 + 0.412429
NA LBJ_2173 Transcriptional regulator/sugar kinasechromosome 1 CDS2578508 897 + 0.455964
NA LBJ_2062 Hypothetical proteinchromosome 1 CDS2430172 369 + 0.325203
NA LBJ_1545 Transcriptional regulator, HTH domainchromosome 1 CDS1820363 309 + 0.378641
NA LBJ_2868 RNA polymerase sigma subunitchromosome 1 CDS3398418 591 - 0.351946
NA LBJ_2951 Transcriptional regulator, AraC familychromosome 1 CDS3503306 1623 + 0.337646
NA LBJ_2412 Hypothetical proteinchromosome 1 CDS2883428 390 - 0.346154
NA LBJ_0400 ATP-dependent DNA helicase, recG-relatedchromosome 1 CDS489316 2175 + 0.429885
NA LBJ_1688 Serine phosphatase sigma subunit regulatorchromosome 1 CDS1992480 1254 - 0.41547
NA LBJ_0848 Transcriptional regulator (ArsR family)chromosome 1 CDS1030928 357 - 0.352941
NA LBJ_0029 ParB-like proteinchromosome 1 CDS37836 876 - 0.40411
NA LBJ_0212 Response regulatorchromosome 1 CDS247527 774 - 0.361757
NA LBJ_0186 Response regulatorchromosome 1 CDS223403 705 - 0.417021
NA LBJ_1723 Transcriptional regulatorchromosome 1 CDS2030989 420 + 0.397619
NA LBJ_2849 Acetyltransferasechromosome 1 CDS3373803 744 + 0.377688
NA LBJ_4239 Transcriptional regulator, AcrR-familychromosome 2 CDS272020 699 + 0.420601
greA LBJ_0705 greA transcription elongation factor-related proteinchromosome 1 CDS844131 2784 + 0.412716
hrcA LBJ_0431 Heat-inducible transcriptional repressor, HrcAchromosome 1 CDS522359 1029 + 0.417881
lexA LBJ_1985 Repressor lexAchromosome 1 CDS2333393 612 - 0.447712
marR LBJ_0498 Transcriptional regulator (MarR family)chromosome 1 CDS603771 459 - 0.418301
mfd LBJ_1666 Transcription-repair coupling factorchromosome 1 CDS1963421 3531 - 0.433588
nusA LBJ_0945 Transcription elongation factorchromosome 1 CDS1129768 1389 + 0.468682
nusB LBJ_2505 Transcription antitermination proteinchromosome 1 CDS2992078 417 + 0.426859
nusG LBJ_2370 Transcription antiterminatorchromosome 1 CDS2837789 546 - 0.448718
rho LBJ_0728 Transcription termination factor Rhochromosome 1 CDS871322 1446 - 0.462656
rnc LBJ_2111 Ribonuclease IIIchromosome 1 CDS2494144 744 - 0.396505
rpoA LBJ_2632 DNA-directed RNA polymerase, alpha subunitchromosome 1 CDS3146204 978 - 0.443763
rpoB LBJ_2365 DNA-directed RNA polymerase, beta subunitchromosome 1 CDS2831712 3681 - 0.471068
rpoC LBJ_2364 DNA-directed RNA polymerase, beta subunitchromosome 1 CDS2827495 4215 - 0.4828
rpoD LBJ_1376 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)chromosome 1 CDS1634149 1758 + 0.415245
rpoE-1 LBJ_0518 RNA polymerase sigma subunitchromosome 1 CDS621321 543 - 0.348066
rpoE-2 LBJ_0173 RNA polymerase sigma subunitchromosome 1 CDS207392 510 + 0.380392
rpoN LBJ_1446 DNA-directed RNA polymerase sigma-54 subunitchromosome 1 CDS1707846 1422 - 0.40436
rsbU-1 LBJ_0248 Serine phosphatase RsbU, regulator of sigma subunitchromosome 1 CDS293075 2088 + 0.390805
rsbU-2 LBJ_0643 Serine phosphatase RsbU, regulator of sigma subunitchromosome 1 CDS775863 1797 - 0.408459
rsbU-3 LBJ_0644 Serine phosphatase RsbU, regulator of sigma subunitchromosome 1 CDS777663 1740 - 0.403448
rsbU-4 LBJ_1820 Serine phosphatase RsbU, regulator of sigma subunitchromosome 1 CDS2149559 2811 - 0.416222
spoT LBJ_0842 GTP pyrophosphokinasechromosome 1 CDS1021983 2025 + 0.441481
srmB LBJ_0225 ATP-dependent RNA helicase (superfamily II)chromosome 1 CDS259462 1542 - 0.417639
vacB LBJ_2992 Exoribonuclease Rchromosome 1 CDS3545302 2268 + 0.38933
 
Leptospira borgpetersenii serovar Hardjo-bovis L550, L550
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LBL_0107 Transcriptional regulator, marR familychromosome 1 CDS120286 441 + 0.371882
NA LBL_2769 Serine/threonine kinase with GAF domainchromosome 1 CDS3274820 5211 + 0.387642
NA LBL_4021 ParB-like proteinchromosome 2 CDS23518 708 + 0.412429
NA LBL_2102 Transcriptional regulatorchromosome 1 CDS2461606 534 - 0.423221
NA LBL_0988 Hypothetical proteinchromosome 1 CDS1153032 369 - 0.325203
NA LBL_0697 Hypothetical proteinchromosome 1 CDS788177 390 + 0.346154
NA LBL_2847 DNA/RNA helicase Superfamily IIchromosome 1 CDS3396690 2856 - 0.397759
NA LBL_2531 Transcriptional regulator, AcrR-familychromosome 1 CDS2999881 615 + 0.406504
NA LBL_2789 Transcriptional regulator, marR familychromosome 1 CDS3311928 450 + 0.433333
NA LBL_1524 Transcriptional regulator, ArsR familychromosome 1 CDS1782161 300 - 0.393333
NA LBL_1396 Sigma factor PP2C-like phosphatasechromosome 1 CDS1627712 981 - 0.376147
NA LBL_1303 Transcriptional regulatorchromosome 1 CDS1532708 426 - 0.389671
NA LBL_2815 Bi-functional protein, with a transcription regulator domainchromosome 1 CDS3350853 795 + 0.432704
NA LBL_2983 ParB-like proteinchromosome 1 CDS3552310 876 - 0.405251
NA LBL_0222 Acetyltransferasechromosome 1 CDS266610 744 - 0.376344
NA LBL_1769 Transcriptional regulator, HTH domainchromosome 1 CDS2061900 309 + 0.378641
NA LBL_4072 Transcriptional regulator, AcrR-familychromosome 2 CDS81214 696 - 0.363506
NA LBL_0187 Transcriptional regulatorchromosome 1 CDS218888 450 - 0.397778
NA LBL_2725 Receiver component of a two-component response regulatorchromosome 1 CDS3229763 666 + 0.421922
NA LBL_2641 Transcriptional regulatorchromosome 1 CDS3132865 549 - 0.409836
NA LBL_1900 Serine phosphatase sigma subunit regulatorchromosome 1 CDS2214093 1254 + 0.416268
NA LBL_2312 Receiver component of a two-component response regulatorchromosome 1 CDS2737434 702 + 0.411681
NA LBL_0589 Transcriptional regulator, PadR familychromosome 1 CDS657260 351 + 0.393162
NA LBL_1087 Transcriptional regulator, HTH domainchromosome 1 CDS1277179 345 - 0.336232
NA LBL_0036 Transcriptional regulator, AcrR-familychromosome 1 CDS43621 624 + 0.379808
NA LBL_4259 Response regulatorchromosome 2 CDS295938 726 + 0.422865
NA LBL_4073 AraC-family transcriptional regulatorchromosome 2 CDS81958 1203 - 0.33084
NA LBL_2897 Response regulatorchromosome 1 CDS3446842 705 + 0.417021
NA LBL_2926 Conserved hypothetical proteinchromosome 1 CDS3478350 390 - 0.353846
NA LBL_4219 RNA polymerase sigma subunitchromosome 2 CDS253444 522 - 0.386973
NA LBL_0290 RNA polymerase sigma subunitchromosome 1 CDS345503 906 + 0.368653
NA LBL_2677 ATP-dependent DNA helicase, recG-relatedchromosome 1 CDS3170793 2175 - 0.428046
NA LBL_0791 Serine phosphatase RsbU, regulator of sigma subunitchromosome 1 CDS901672 1764 - 0.406463
NA LBL_1942 Transcriptional regulatorchromosome 1 CDS2265624 420 + 0.397619
NA LBL_1865 ParB-like proteinchromosome 1 CDS2172893 399 + 0.373434
NA LBL_0557 Transcriptional regulator, AcrR-familychromosome 1 CDS616197 594 + 0.397306
NA LBL_0343 Transcriptional regulator, ArsR familychromosome 1 CDS403477 312 - 0.333333
NA LBL_2037 Acetyltransferasechromosome 1 CDS2382110 498 + 0.417671
NA LBL_2901 Serine phosphatase RsbU, regulator of sigma subunitchromosome 1 CDS3451433 2397 + 0.365874
NA LBL_2801 Transcriptional regulator, AcrR-familychromosome 1 CDS3326216 594 + 0.383838
NA LBL_4085 Regulator of sigma subunitchromosome 2 CDS94982 1485 - 0.40404
NA LBL_1319 Sensor protein of a two-component response regulatorchromosome 1 CDS1548648 669 + 0.427504
NA LBL_0280 Transcriptional regulatorchromosome 1 CDS331364 546 + 0.408425
NA LBL_1008 Transcriptional regulatorchromosome 1 CDS1175782 615 + 0.421138
NA LBL_2989 Transcription antiterminatorchromosome 1 CDS3558678 540 - 0.344444
NA LBL_2382 Serine phosphatase, regulator of sigma subunitchromosome 1 CDS2824681 1131 - 0.431477
NA LBL_4253 Transcriptional regulator, AcrR-familychromosome 2 CDS289596 699 + 0.420601
NA LBL_0908 RNA polymerase sigma subunitchromosome 1 CDS1055368 624 + 0.407051
NA LBL_2588 Transcriptional regulatorchromosome 1 CDS3063022 774 - 0.426357
NA LBL_2234 Transcriptional regulator (ArsR family)chromosome 1 CDS2631684 327 + 0.357798
NA LBL_0335 Receiver component of a response regulatorchromosome 1 CDS394780 678 + 0.356932
NA LBL_2870 Response regulatorchromosome 1 CDS3422632 774 + 0.361757
NA LBL_2441 RNA polymerase sigma subunitchromosome 1 CDS2890973 510 + 0.396078
NA LBL_2782 RNA polymerase sigma subunitchromosome 1 CDS3302255 525 + 0.333333
NA LBL_1164 Transcriptional regulatorchromosome 1 CDS1377126 321 + 0.386293
NA LBL_1985 Transcriptional regulator, AcrR-familychromosome 1 CDS2315186 552 + 0.38587
NA LBL_0536 Superfamily II DNA and RNA helicasechromosome 1 CDS588970 1650 - 0.424848
NA LBL_1897 RNA binding proteinchromosome 1 CDS2212050 366 + 0.412568
NA LBL_0203 RNA polymerase sigma subunitchromosome 1 CDS242189 549 + 0.35337
NA LBL_2167 Transcriptional regulator/sugar kinasechromosome 1 CDS2546058 897 + 0.455964
NA LBL_0529 Transcriptional regulatorchromosome 1 CDS580979 945 - 0.406349
NA LBL_1293 Transcriptional regulator, MarR familychromosome 1 CDS1518768 441 - 0.387755
NA LBL_1838 RNA polymerase sigma subunitchromosome 1 CDS2141536 801 - 0.404494
NA LBL_4076 AraC-family transcriptional regulatorchromosome 2 CDS85508 1140 - 0.37807
NA LBL_4111 Serine phosphatase RsbU, regulator of sigma subunitchromosome 2 CDS126453 1749 - 0.408805
NA LBL_2389 Transcriptional regulator, ArsR familychromosome 1 CDS2831439 387 + 0.452196
NA LBL_0785 Transcriptional regulator, AcrR-familychromosome 1 CDS895916 600 + 0.381667
NA LBL_0113 Transcriptional regulator, AraC familychromosome 1 CDS127865 1623 - 0.33703
NA LBL_2009 Transcriptional regulator, AcrR-familychromosome 1 CDS2344394 705 - 0.419858
NA LBL_0902 Sigma factor regulatory proteinchromosome 1 CDS1049300 1383 + 0.404917
NA LBL_1617 Transcriptional regulator, AcrR-familychromosome 1 CDS1896653 579 - 0.379965
NA LBL_2587 RNA-binding proteinchromosome 1 CDS3062636 261 + 0.371648
NA LBL_3001 RNA polymerase sigma subunitchromosome 1 CDS3572238 885 + 0.477966
NA LBL_2894 RNA polymerase sigma subunitchromosome 1 CDS3445191 600 + 0.363333
NA LBL_1086 Transcriptional regulatorchromosome 1 CDS1276118 306 - 0.343137
NA LBL_4001 ParB-like proteinchromosome 2 CDS875 846 + 0.353428
NA LBL_2820 Transcriptional regulator, AcrR-familychromosome 1 CDS3360060 513 + 0.407407
NA LBL_4013 Response regulator of a two component regulatory systemchromosome 2 CDS14693 693 + 0.445887
NA LBL_0695 AraC-family transcriptional regulatorchromosome 1 CDS786454 1206 - 0.311774
NA LBL_1376 RNA polymerase sigma subunitchromosome 1 CDS1609293 549 + 0.409836
greA LBL_2374 greA transcription elongation factor-related proteinchromosome 1 CDS2815299 2784 - 0.412716
hrcA LBL_2646 Heat-inducible transcriptional repressor, HrcAchromosome 1 CDS3138907 1029 - 0.41691
lexA LBL_1071 Repressor lexAchromosome 1 CDS1256005 612 - 0.447712
marR LBL_2581 Transcriptional regulator (MarR family)chromosome 1 CDS3058142 459 + 0.418301
mfd LBL_1885 Transcription-repair coupling factorchromosome 1 CDS2198023 3531 - 0.433588
nusA LBL_2088 Transcription elongation factorchromosome 1 CDS2446953 1389 - 0.468682
nusB LBL_0634 Transcription antitermination proteinchromosome 1 CDS706022 417 + 0.426859
nusG LBL_0738 Transcription antiterminatorchromosome 1 CDS833650 546 + 0.448718
rho LBL_2351 Transcription termination factor Rhochromosome 1 CDS2789422 1446 + 0.462656
rnc LBL_0940 Ribonuclease IIIchromosome 1 CDS1088661 744 + 0.395161
rpoA LBL_0480 DNA-directed RNA polymerase, alpha subunitchromosome 1 CDS526888 978 + 0.44274
rpoA-1 LBL_0440 DNA-directed RNA polymerase, alpha subunitchromosome 1 CDS497601 978 + 0.44274
rpoB LBL_0743 DNA-directed RNA polymerase, beta subunitchromosome 1 CDS836592 3681 + 0.470524
rpoC LBL_0744 DNA-directed RNA polymerase, beta subunitchromosome 1 CDS840275 4215 + 0.4828
rpoD LBL_1601 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)chromosome 1 CDS1875873 1758 + 0.415245
rpoE-1 LBL_2561 RNA polymerase sigma subunitchromosome 1 CDS3040508 543 + 0.348066
rpoE-2 LBL_2910 RNA polymerase sigma subunitchromosome 1 CDS3463048 510 - 0.380392
rpoN LBL_1670 DNA-directed RNA polymerase sigma-54 subunitchromosome 1 CDS1949387 1422 - 0.40436
rsbU-1 LBL_2832 Serine phosphatase RsbU, regulator of sigma subunitchromosome 1 CDS3375763 2088 - 0.390805
rsbU-2 LBL_2436 Serine phosphatase RsbU, regulator of sigma subunitchromosome 1 CDS2884679 1797 + 0.407902
rsbU-3 LBL_2435 Serine phosphatase RsbU, regulator of sigma subunitchromosome 1 CDS2882936 1740 + 0.402874
rsbU-4 LBL_1463 Serine phosphatase RsbU, regulator of sigma subunitchromosome 1 CDS1709446 2811 + 0.415866
spoT LBL_2240 GTP pyrophosphokinasechromosome 1 CDS2638840 2025 - 0.440988
srmB LBL_2858 ATP-dependent RNA helicase (superfamily II)chromosome 1 CDS3411882 1542 - 0.418288
vacB LBL_0073 Exoribonuclease Rchromosome 1 CDS85207 2268 - 0.388889
 
Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA LIC10144 RNA polymerase ECF-type sigma factorchromosome I CDS173425 525 + 0.32
NA LIC12654 transcriptional repressor (LexA family)chromosome I CDS3218605 630 + 0.350794
NA LIC11817 RNA polymerase ECF-type sigma factorchromosome I CDS2210424 555 - 0.389189
NA LIC12798 transcriptional regulator (TetR family)chromosome I CDS3404779 615 + 0.386992
NA LIC10275 conserved hypothetical proteinchromosome I CDS313254 315 - 0.27619
NA LIC11617 transcriptional regulator (ArsR family)chromosome I CDS1979639 300 - 0.396667
NA LIC13273 sigma factor regulatory proteinchromosome I CDS4012567 2379 + 0.332493
NA LIC12066 transcriptional regulator (MarR family)chromosome I CDS2500970 477 + 0.343816
NA LIC10041 transcription activator or transcription antitermination factorchromosome I CDS49986 540 - 0.338889
NA LIC11653 conserved hypothetical proteinchromosome I CDS2018797 732 - 0.357924
NA LIC13150 ATP-dependent DNA helicase proteinchromosome I CDS3860811 2175 + 0.382069
NA LIC13214 putative cytochrome oxidase subunitchromosome I CDS3942741 585 + 0.360684
NA LIC13039 transcriptional regulator (MarR family)chromosome I CDS3711765 450 + 0.371111
NA LIC12257 conserved hypothetical proteinchromosome I CDS2723491 513 + 0.354776
NA LIC12206 transcriptional regulator (MarR family)chromosome I CDS2659190 321 - 0.345794
NA LIC20115 RNA polymerase ECF-type sigma factorchromosome II CDS137601 522 - 0.394636
NA LIC12472 acetyltransferasechromosome I CDS2994211 357 - 0.330532
NA LIC12046 hypothetical proteinchromosome I CDS2465784 741 - 0.260459
NA LIC12757 RNA polymerase ECF-type sigma factorchromosome I CDS3354605 543 - 0.338858
NA LIC13408 transcriptional regulator (ArsR family)chromosome I CDS4178745 354 - 0.316384
NA LIC12807 response regulatorchromosome I CDS3412218 702 + 0.349003
NA LIC20021 ParBchromosome II CDS21752 708 + 0.361582
NA LIC11896 response regulatorchromosome I CDS2293595 723 - 0.370678
NA LIC13073 transcriptional regulator (TetR family)chromosome I CDS3754017 630 - 0.34127
NA LIC10568 conserved hypothetical proteinchromosome I CDS693096 744 + 0.321237
NA LIC10666 transcriptional regulator (ArsR family)chromosome I CDS810487 381 - 0.454068
NA LIC12738 transcriptional regulator (MarR family)chromosome I CDS3336564 456 - 0.375
NA LIC11353 ParB family proteinchromosome I CDS1667349 399 - 0.345865
NA LIC13269 response regulatorchromosome I CDS4007977 702 + 0.383191
NA LIC10375 transcriptional regulator (TetR family)chromosome I CDS424630 687 - 0.317322
NA LIC10975 transcriptional regulator (AraC family)chromosome I CDS1178726 1182 - 0.313029
NA LIC10425 conserved hypothetical proteinchromosome I CDS486553 945 + 0.352381
NA LIC10332 response regulatorchromosome I CDS377576 762 + 0.374016
NA LIC11482 conserved hypothetical proteinchromosome I CDS1830045 366 + 0.325137
NA LIC20082 transcriptional regulator (ArsR family)chromosome II CDS92473 1017 + 0.431662
NA LIC20276 conserved hypothetical proteinchromosome II CDS349231 939 + 0.381257
NA LIC10557 response regulatorchromosome I CDS681980 684 + 0.337719
NA LIC11684 transcriptional regulator (Sir2 family)chromosome I CDS2046831 741 - 0.376518
NA LIC13285 RNA polymerase ECF-type sigma factorchromosome I CDS4028692 510 - 0.339216
NA LIC12582 transcriptional regulator (ArsR family)chromosome I CDS3129565 351 + 0.344729
NA LIC20104 DNA binding proteinchromosome II CDS121327 1185 - 0.339241
NA LIC13266 RNA polymerase ECF-type sigma factorchromosome I CDS4005292 579 + 0.352332
NA LIC12616 conserved hypothetical proteinchromosome I CDS3164457 525 - 0.358095
NA LIC13025 conserved hypothetical proteinchromosome I CDS3687142 432 + 0.284722
NA LIC20029 conserved hypothetical proteinchromosome II CDS28376 438 + 0.376712
NA LIC12825 conserved hypothetical proteinchromosome I CDS3427474 546 - 0.327839
NA LIC12438 transcriptional regulatorchromosome I CDS2958782 552 + 0.317029
NA LIC13088 response regulatorchromosome I CDS3774974 672 + 0.377976
NA LIC11110 histidine kinase response regulator hybrid proteinchromosome I CDS1371949 915 - 0.391257
NA LIC11380 RNA polymerase sigma-28 factorchromosome I CDS1697815 801 + 0.37578
NA LIC20013 response regulatorchromosome II CDS12030 693 + 0.406926
NA LIC10644 RNA polymerase ECF-type sigma factorchromosome I CDS786949 525 - 0.321905
NA LIC11676 transcriptional regulator (TetR family)chromosome I CDS2040366 654 - 0.331804
NA LIC10678 response regulatorchromosome I CDS822285 1134 + 0.39418
NA LIC20254 response regulatorchromosome II CDS320975 732 + 0.374317
NA LIC12016 conserved hypothetical proteinchromosome I CDS2427612 408 + 0.362745
NA LIC12490 RNA polymerase ECF-type sigma factorchromosome I CDS3016639 621 - 0.392915
NA LIC11191 transcriptional regulatorchromosome I CDS1467284 297 + 0.350168
NA LIC13047 conserved hypothetical proteinchromosome I CDS3719569 297 - 0.316498
NA LIC20134 conserved hypothetical proteinchromosome II CDS157308 372 - 0.330645
NA LIC10598 conserved hypothetical proteinchromosome I CDS730692 2055 + 0.346472
NA LIC11584 transcriptional regulator (TetR family)chromosome I CDS1942994 603 - 0.439469
NA LIC12666 acetyltransferasechromosome I CDS3226395 459 + 0.503268
NA LIC12496 sigma factor regulatory proteinchromosome I CDS3021994 1383 - 0.357918
NA LIC20111 sigma factor regulatory proteinchromosome II CDS131807 1494 - 0.363454
NA LIC20275 ParBchromosome II CDS347953 846 + 0.351064
NA LIC11231 transcriptional regulator (TetR family)chromosome I CDS1525050 552 - 0.344203
NA LIC10167 conserved hypothetical proteinchromosome I CDS197666 306 - 0.369281
NA LIC13242 response regulatorchromosome I CDS3978293 771 + 0.317769
NA LIC13292 conserved hypothetical proteinchromosome I CDS4036193 528 + 0.304924
NA LIC12452 conserved hypothetical proteinchromosome I CDS2970193 564 - 0.390071
NA LIC20105 DNA binding proteinchromosome II CDS122757 1110 - 0.335135
NA LIC10395 transcriptional regulator (TetR family)chromosome I CDS451514 612 - 0.379085
NA LIC11796 sigma factor regulatory proteinchromosome I CDS2189530 981 + 0.329256
NA LIC13024 conserved hypothetical proteinchromosome I CDS3686669 369 + 0.336043
NA LIC10279 conserved hypothetical proteinchromosome I CDS318164 771 + 0.337224
NA LIC11283 conserved hypothetical proteinchromosome I CDS1583910 420 - 0.369048
NA LIC10521 conserved hypothetical proteinchromosome I CDS628614 549 - 0.360656
NA LIC13441 transcriptional regulator (MarR family)chromosome I CDS4218355 447 - 0.326622
NA LIC12792 conserved hypothetical proteinchromosome I CDS3399054 774 - 0.379845
NA LIC11154 transcriptional regulatorchromosome I CDS1423318 612 + 0.387255
NA LIC12619 conserved hypothetical proteinchromosome I CDS3168598 1077 + 0.379759
NA LIC11848 conserved hypothetical proteinchromosome I CDS2242765 831 + 0.392298
NA LIC11317 conserved hypothetical proteinchromosome I CDS1624216 2289 + 0.32547
NA LIC11012 guanosine polyphosphate pyrophosphohydrolases/synthetaseschromosome I CDS1233953 2025 + 0.382716
NA LIC10386 RNA polymerase ECF-type sigma factorchromosome I CDS439864 549 + 0.313297
NA LIC12189 conserved hypothetical proteinchromosome I CDS2642892 528 - 0.363636
NA LIC20178 DNA binding proteinchromosome II CDS221026 1272 + 0.286164
NA LIC12368 conserved hypothetical proteinchromosome I CDS2869757 1197 - 0.381788
NA LIC10214 transcriptional regulator (CarD family)chromosome I CDS243511 594 + 0.400673
NA LIC10013 sigma 54 activatorchromosome I CDS17484 894 + 0.324385
NA LIC10378 transcriptional regulator (PadR family)chromosome I CDS429051 351 + 0.361823
NA LIC13427 response regulatorchromosome I CDS4202746 408 - 0.232843
NA LIC20081 transcriptional regulator (TetR family)chromosome II CDS91097 579 - 0.303972
NA LIC10321 conserved hypothetical proteinchromosome I CDS364857 2091 - 0.346724
NA LIC11146 putative transcriptional regulator (DeoR family)chromosome I CDS1413750 954 + 0.354298
NA LIC12431 transcriptional regulator (TetR family)chromosome I CDS2950361 756 - 0.366402
NA LIC10168 phage-related proteinchromosome I CDS198377 399 + 0.360902
NA LIC10559 RNA polymerase ECF-type sigma factorchromosome I CDS684522 546 + 0.395604
chpI LIC11192 ChpIchromosome I CDS1468396 249 + 0.325301
dead LIC13230 ATP-dependent RNA helicasechromosome I CDS3965016 1566 + 0.386335
glcK LIC12312 glucokinasechromosome I CDS2787547 897 + 0.397993
hepA LIC13220 ATP-dependent RNA helicasechromosome I CDS3951011 2847 - 0.354759
hrcA LIC10526 heat-inducible transcriptional repressorchromosome I CDS634486 1029 - 0.373178
kdpE LIC10994 response regulatorchromosome I CDS1210408 684 + 0.390351
lexA LIC12305 transcriptional repressor (LexA family)chromosome I CDS2779574 621 - 0.415459
mfd LIC11455 transcription-repair coupling factorchromosome I CDS1792408 3561 + 0.364504
nusA LIC12706 NusAchromosome I CDS3292762 1383 - 0.416486
nusB LIC10404 transcription termination factorchromosome I CDS460402 381 + 0.370079
nusG LIC10748 transcription antitermination proteinchromosome I CDS909280 546 + 0.382784
parB LIC13488 ParBchromosome I CDS4262984 876 - 0.360731
recG LIC11791 ATP-dependent DNA helicasechromosome I CDS2182516 1710 - 0.384211
rhlE LIC10738 ATP-dependent RNA helicasechromosome I CDS899573 1623 + 0.378928
rho LIC12636 Rhochromosome I CDS3195007 1449 + 0.429262
rnC LIC20066 dsRNase IIIchromosome II CDS72207 744 + 0.350806
rnR LIC10035 ribonuclease Rchromosome I CDS41921 2256 + 0.326684
rpoA LIC12846 DNA-directed RNA polymerase alpha chainchromosome I CDS3455526 978 - 0.399796
rpoB LIC10753 RNA polymerase beta subunitchromosome I CDS912196 3681 + 0.446618
rpoC LIC10754 DNA-directed RNA polymerase beta' chain proteinchromosome I CDS915880 4215 + 0.455042
rpoD LIC11701 RNA polymerase sigma-70 factorchromosome I CDS2067509 1758 - 0.382821
rpoN LIC11545 RNA polymerase sigma-54 factorchromosome I CDS1907249 1422 + 0.35865
wecD LIC13189 acetyltransferasechromosome I CDS3903152 456 - 0.324561
yoaA LIC12019 ATP-dependent helicasechromosome I CDS2432866 1977 + 0.371775
 
Leptospira interrogans serovar lai str. 56601
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA conserved hypothetical proteinchromosome I CDS533806 432 - 0.284722
NA Transcriptional regulator, marR familychromosome I CDS893626 456 + 0.375
NA two-component response regulatorchromosome I CDS1988799 723 + 0.367911
NA two-component response regulator transcriptional regulator proteinchromosome I CDS3829606 672 + 0.376488
NA hypothetical proteinchromosome I CDS1054408 1077 - 0.379759
NA hypothetical proteinchromosome I CDS1788885 270 + 0.266667
NA conserved hypothetical proteinchromosome I CDS365935 2091 - 0.345768
NA two-component response regulatorchromosome I CDS4038049 771 + 0.319066
NA Transcriptional regulator, tetR familychromosome I CDS2240933 654 + 0.331804
NA hypothetical proteinchromosome I CDS1810898 378 + 0.375661
NA putative regulation proteinchromosome I CDS1201594 1392 + 0.35704
NA two-component response regulatorchromosome I CDS3608213 684 - 0.336257
NA transcriptional regulator, ArsR familychromosome I CDS4234949 354 - 0.316384
NA conserved hypothetical proteinchromosome I CDS2454742 366 - 0.325137
NA transcriptional regulator, ArsR familychromosome I CDS2303362 300 + 0.393333
NA hypothetical proteinchromosome I CDS3183121 204 + 0.318627
NA ATP-dependent RNA helicasechromosome I CDS3394804 1623 - 0.378312
NA Predicted transcriptional regulatorchromosome I CDS501538 297 + 0.313131
NA Transcriptional regulator, tetR familychromosome I CDS2768216 552 + 0.344203
NA two-component response regulatorchromosome I CDS3477080 1134 - 0.39418
NA RNA polymerase sigma-70 factor, ECF subfamilychromosome I CDS2071513 555 + 0.389189
NA Sigma factor sigB regulation protein rsbUchromosome I CDS3556431 2055 - 0.345985
NA Predicted transcriptional regulatorchromosome I CDS2825787 297 - 0.350168
NA Acetyltransferaseschromosome I CDS1505194 513 - 0.354776
NA Acetyltransferaseschromosome I CDS804471 546 + 0.333333
NA conserved hypothetical proteinchromosome I CDS534342 369 - 0.330623
NA predicted transcriptional regulatorchromosome I CDS314349 354 - 0.271186
NA hypothetical proteinchromosome I CDS1769615 621 - 0.31401
NA Transcriptional regulator, tetR familychromosome I CDS454664 612 - 0.380719
NA probable acetyltransferasechromosome I CDS3597081 744 - 0.322581
NA Transcriptional regulator, tetR familychromosome I CDS1275022 756 + 0.365079
NA Transcriptional regulator, marR familychromosome I CDS4274755 447 - 0.324385
NA ATP-dependent RNA helicasechromosome I CDS4010598 2847 - 0.356164
NA unknown proteinchromosome I CDS319294 771 + 0.338521
NA ATP-dependent RNA helicasechromosome I CDS4024617 1566 + 0.386973
NA conserved hypothetical proteinchromosome I CDS2708865 420 + 0.369048
NA transcriptional regulator, Fis familychromosome I CDS17424 894 + 0.325503
NA Predicted transcriptional regulatorchromosome I CDS1266483 552 - 0.313406
NA hypothetical proteinchromosome I CDS3387142 546 - 0.382784
NA hypothetical proteinchromosome I CDS1230032 345 + 0.321739
NA Transcriptional regulator, marR familychromosome I CDS1570131 321 + 0.345794
NA Transcriptional regulator, tetR familychromosome I CDS826837 615 - 0.386992
NA conserved hypothetical proteinchromosome I CDS1356648 1197 + 0.381788
NA conserved hypothetical proteinchromosome I CDS1255068 564 + 0.391844
NA putative outermembrane proteinchromosome I CDS2039412 831 - 0.392298
NA Predicted transcriptional regulatorchromosome I CDS1855009 426 - 0.359155
NA two-component response regulatorchromosome I CDS378656 762 + 0.372703
NA putative sigma-B regulatorchromosome I CDS2091947 981 - 0.331295
NA hypothetical proteinchromosome I CDS4259012 408 - 0.232843
NA hypothetical proteinchromosome I CDS1059114 525 + 0.358095
NA predicted transcriptional regulatorchromosome I CDS832386 774 + 0.381137
NA Predicted transcriptional regulatorchromosome I CDS198079 423 + 0.35461
NA transcriptional regulator, ArsR familychromosome I CDS3489578 381 + 0.456693
NA Transcriptional regulator, tetR familychromosome I CDS426865 687 - 0.31441
NA cytochrome oxidase subunit IVchromosome I CDS4002303 585 + 0.362393
NA ATP-dependent DNA helicasechromosome I CDS1848186 1977 - 0.372281
NA hypothetical proteinchromosome I CDS3671805 144 + 0.354167
NA Transcriptional regulator, marR familychromosome I CDS509194 450 - 0.371111
NA conserved hypothetical proteinchromosome I CDS1585193 528 + 0.367424
NA conserved hypothetical proteinchromosome I CDS431264 351 + 0.361823
NA transcriptional regulator, AraC familychromosome I CDS3117584 1182 + 0.311337
NA transcription regulatorchromosome I CDS2880382 954 - 0.357442
NA predicted transcriptional regulator, copG familychromosome I CDS1797543 261 + 0.318008
NA two-component hybrid sensor and regulatorchromosome I CDS2923216 915 + 0.39235
NA conserved hypothetical proteinchromosome I CDS2660858 2289 - 0.32547
NA Probable RNA polymerase ECF-type sigma factorchromosome I CDS442005 549 + 0.313297
NA hypothetical proteinchromosome I CDS1768259 426 + 0.29108
NA transcriptional regulator, ArsR familychromosome I CDS1094187 351 - 0.347578
NA VacB proteinchromosome I CDS41732 2247 + 0.327548
NA transcription-repair coupling factorchromosome I CDS2488914 3561 - 0.365066
NA ROK family proteinchromosome I CDS1438638 897 - 0.396878
NA Transcriptional regulatorschromosome I CDS243351 594 + 0.400673
NA Predicted transcriptional regulatorchromosome I CDS2870942 612 - 0.387255
NA DNA repair helicasechromosome I CDS2098231 1710 + 0.383041
NA two-component response regulator transcriptional regulator proteinchromosome I CDS820230 702 - 0.349003
NA probable luxR familytranscriptional regulatorchromosome I CDS4097575 528 + 0.30303
NA Transcriptional regulator, marR familychromosome I CDS1728735 477 - 0.343816
NA Transcription regulatorchromosome I CDS3786562 945 - 0.351323
NA Regulatory SIR2 family proteinchromosome I CDS2234598 741 + 0.377868
NA hypothetical proteinchromosome I CDS197391 306 - 0.369281
NA Transcriptional regulator, tetR familychromosome I CDS3808608 633 - 0.339652
NA putative outermembrane proteinchromosome I CDS2262438 732 + 0.355191
NA Probable RNA polymerase ECF-type sigma factorchromosome I CDS3605809 546 - 0.397436
NA Probable chromosome partitioning protein parBchromosome I CDS2619440 399 + 0.343358
NA Acetyltransferaseschromosome I CDS3963054 456 - 0.324561
NA conserved hypothetical proteinchromosome I CDS3662758 549 + 0.360656
LB015 two-component response regulatorchromosome II CDS12056 693 + 0.405483
LB037 putative sucrose/H+ symporterchromosome II CDS29824 459 + 0.368192
LB084 ribonuclease IIIchromosome II CDS74293 744 + 0.352151
LB104 putative TetR-family transcriptional regulatorchromosome II CDS93181 579 - 0.300518
LB105 transcriptional regulator, ArsR familychromosome II CDS94594 1017 + 0.425762
LB130 transcriptional regulator, AraC familychromosome II CDS123146 1146 - 0.338569
LB131 putative transcriptional regulator, araC family proteinchromosome II CDS124576 1110 - 0.335135
LB139 putative regulation protein contains HAMP domainchromosome II CDS133632 1494 - 0.364792
LB144 RNA polymerase ECF-type sigma factorchromosome II CDS139426 522 - 0.396552
LB164 unknown protein confirmed by proteomicschromosome II CDS159124 372 - 0.330645
LB228 Putative AraC-type Regulatorchromosome II CDS224104 1233 + 0.290349
LB325 transcriptional regulator, TetR familychromosome II CDS320145 729 + 0.351166
LB333 two-component response regulatorchromosome II CDS327874 732 + 0.372951
LB367 hypothetical proteinchromosome II CDS357993 939 + 0.381257
chpI ChpI proteinchromosome I CDS2824722 249 - 0.325301
fliA RNA polymerase sigma-28 factorchromosome I CDS2588577 801 - 0.37578
hrcA Heat-inducible transcription repressor hrcAchromosome I CDS3656414 1029 + 0.371234
kdpE Regulatory protein KdpEchromosome I CDS3087641 684 - 0.393275
lexA LexA repressorchromosome I CDS1448244 621 + 0.415459
nusA probable transcription termination factor nusAchromosome I CDS935692 1383 + 0.41504
nusB N utilization substance protein Bchromosome I CDS461733 417 + 0.376499
nusG transcriptional activator affecting biosynthesis of lipopolysaccharide core, F pilin, and haemolysinchromosome I CDS49788 540 - 0.340741
parB1 Probable chromosome partitioning protein parBchromosome I CDS1812149 882 + 0.302721
parB2 ParB-like nuclease domainchromosome I CDS4318191 876 - 0.360731
parB3 ParB proteinchromosome II CDS23222 708 + 0.362994
parB4 ParB family proteinchromosome II CDS356714 846 + 0.351064
recG ATP-dependent DNA helicase recGchromosome I CDS3918427 2175 + 0.38069
regX Sensory transduction protein regX3chromosome I CDS4069396 702 + 0.38604
relA GTP pyrophosphokinasechromosome I CDS3060298 2043 - 0.383749
rho Transcription termination factor rhochromosome I CDS1027647 1449 - 0.428571
rpoA DNA-directed RNA polymerase alpha subunitchromosome I CDS774912 978 + 0.399796
rpoB RNA polymerase beta subunitchromosome I CDS3381091 3681 - 0.448791
rpoC DNA-directed RNA polymerase, beta' subunitchromosome I CDS3376873 4215 - 0.45433
rpoD RNA polymerase sigma-70 factorchromosome I CDS2212954 1758 + 0.386234
rpoE1 Probable RNA polymerase ECF-type sigma factorchromosome I CDS1207444 621 + 0.394525
rpoE2 Probable RNA polymerase ECF-type sigma factorchromosome I CDS4066711 579 + 0.352332
rpoE3 Probable RNA polymerase ECF-type sigma factorchromosome I CDS4090101 510 - 0.339216
rpoN transcription initiation factor sigma 54chromosome I CDS2372766 1422 - 0.35865
rsbP SigmaB regulation protein phosphatase 2C rsbPchromosome I CDS4073986 2379 + 0.332072
sigW Probable RNA polymerase ECF-type sigma factorchromosome I CDS174390 525 + 0.321905
sigX Probable RNA polymerase ECF-type sigma factorchromosome I CDS875499 543 + 0.338858
 
Treponema denticola ATCC 35405
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA TDE2367 transcriptional regulator, putativechromosome CDS2401220 645 + 0.324031
NA TDE0400 transcriptional regulator, LysR familychromosome CDS450973 921 - 0.37025
NA TDE2650 transcriptional regulator, putativechromosome CDS2688756 366 - 0.352459
NA TDE0876 conserved hypothetical proteinchromosome CDS898429 186 - 0.268817
NA TDE0814 transcriptional regulator, putativechromosome CDS835799 171 - 0.362573
NA TDE1495 hypothetical proteinchromosome CDS1539686 621 - 0.293076
NA TDE2277 transcriptional regulator, Sir2 familychromosome CDS2312820 756 + 0.412698
NA TDE0348 transcriptional regulator, TetR familychromosome CDS390597 597 + 0.346734
NA TDE0820 transcriptional regulator, TetR familychromosome CDS843804 660 - 0.404545
NA TDE0556 hypothetical proteinchromosome CDS591628 555 - 0.4
NA TDE0033 DNA-binding response regulatorchromosome CDS40067 720 - 0.348611
NA TDE0133 transcriptional regulator, GntR familychromosome CDS152513 750 + 0.376
NA TDE0037 transcriptional regulator, AbrB familychromosome CDS42641 249 - 0.345382
NA TDE0542 acetyltransferase, GNAT familychromosome CDS582720 483 + 0.372671
NA TDE0676 conserved hypothetical proteinchromosome CDS715000 420 + 0.395238
NA TDE2474 acetyltransferase, GNAT familychromosome CDS2496692 495 - 0.391919
NA TDE1690 hypothetical proteinchromosome CDS1746673 618 - 0.357605
NA TDE2109 ATP-dependent RNA helicase, DEAD/DEAH box familychromosome CDS2133665 1713 - 0.446001
NA TDE0440 DNA-binding proteinchromosome CDS496091 276 + 0.347826
NA TDE0989 hypothetical proteinchromosome CDS1017272 237 + 0.350211
NA TDE0259 transcriptional regulator, MarR familychromosome CDS293397 453 + 0.377483
NA TDE2486 hypothetical proteinchromosome CDS2509377 555 + 0.259459
NA TDE2778 PspC domain proteinchromosome CDS2829461 234 - 0.384615
NA TDE0630 sigma factor regulatory protein, putativechromosome CDS663980 1452 + 0.360882
NA TDE1664 conserved domain proteinchromosome CDS1718002 1041 + 0.402498
NA TDE0246 transcriptional regulator, TetR familychromosome CDS281186 570 - 0.364912
NA TDE0441 hypothetical proteinchromosome CDS496466 270 - 0.248148
NA TDE2684 hypothetical proteinchromosome CDS2724270 669 - 0.403587
NA TDE1789 hypothetical proteinchromosome CDS1827428 276 - 0.275362
NA TDE0393 transcriptional regulator, TetR familychromosome CDS443272 648 - 0.302469
NA TDE2627 transcriptional regulator, TetR familychromosome CDS2668622 609 - 0.449918
NA TDE1305 DNA-binding proteinchromosome CDS1340240 219 + 0.39726
NA TDE1114 transcriptional regulator, TetR familychromosome CDS1148324 672 - 0.452381
NA TDE1169 phage DNA-binding protein, excisionase familychromosome CDS1199569 246 - 0.418699
NA TDE2721 helicase domain proteinchromosome CDS2777923 1773 - 0.455161
NA TDE1035 transcriptional regulator, PadR familychromosome CDS1063594 327 + 0.406728
NA TDE1107 N utilization substance protein A, putativechromosome CDS1140980 1488 - 0.395833
NA TDE2659 GAF domain/HD domain proteinchromosome CDS2695990 1254 + 0.395534
NA TDE1606 transcriptional regulator, TetR familychromosome CDS1656271 678 - 0.371681
NA TDE0114 iron-dependent transcriptional regulatorchromosome CDS133671 420 - 0.37381
NA TDE0149 DNA-binding response regulatorchromosome CDS169961 606 + 0.334983
NA TDE1330 conserved hypothetical protein TIGR00244chromosome CDS1365519 456 + 0.383772
NA TDE1497 conserved hypothetical proteinchromosome CDS1543348 417 + 0.352518
NA TDE0937 RNA polymerase sigma-70 factor family proteinchromosome CDS960091 861 + 0.379791
NA TDE1990 ATP-dependent helicase, DinG familychromosome CDS2006457 2130 - 0.399531
NA TDE0006 Snf2 family proteinchromosome CDS6200 3585 - 0.407252
NA TDE1719 transcriptional regulator, MarR familychromosome CDS1774169 438 + 0.429224
NA TDE0168 transcriptional regulator, GntR familychromosome CDS196757 402 - 0.400498
NA TDE2487 acetyltransferase, GNAT familychromosome CDS2509947 507 + 0.360947
NA TDE1346 RNA polymerase sigma-70 factor family proteinchromosome CDS1385359 1860 + 0.394624
NA TDE1953 transcriptional regulator, TetR familychromosome CDS1969120 642 - 0.394081
NA TDE2115 HAMP domain proteinchromosome CDS2140270 4581 - 0.358
NA TDE1371 RNB-like family proteinchromosome CDS1413388 1872 - 0.40812
NA TDE0090 hypothetical proteinchromosome CDS108634 663 - 0.348416
NA TDE0056 DNA-directed RNA polymerase, omega subunit, putativechromosome CDS65846 207 + 0.400966
NA TDE0801 conserved hypothetical proteinchromosome CDS824015 435 - 0.335632
NA TDE0091 RNA polymerase sigma-24 factor, putativechromosome CDS109280 543 - 0.383057
NA TDE1647 DNA-binding proteinchromosome CDS1696245 348 - 0.336207
NA TDE1784 transcriptional activator, AraC familychromosome CDS1823671 843 - 0.405694
NA TDE2412 acetyltransferase, GNAT familychromosome CDS2439885 468 - 0.314103
NA TDE1365 transcriptional regulator, TetR familychromosome CDS1407895 579 + 0.295337
NA TDE0878 conserved hypothetical proteinchromosome CDS899792 198 + 0.318182
NA TDE0817 histidine kinase-related ATPase, putativechromosome CDS838940 1080 + 0.330556
NA TDE2079 sigma-54 dependent transcriptional regulator, putativechromosome CDS2107608 1518 - 0.399209
NA TDE0808 acetyltransferase, GNAT familychromosome CDS829270 471 - 0.33758
NA TDE0606 ParB family proteinchromosome CDS643329 894 - 0.395973
NA TDE0891 transcriptional regulator, putativechromosome CDS907732 921 + 0.365907
NA TDE2290 transcriptional regulator, putativechromosome CDS2327617 627 + 0.422648
NA TDE2445 DNA-binding proteinchromosome CDS2474422 306 + 0.297386
NA TDE0339 transcriptional regulator, TetR familychromosome CDS378011 618 + 0.444984
NA TDE1579 fibronectin/fibrinogen-binding protein, internal deletionchromosome CDS1626164 1416 - 0.35452
NA TDE2309 sigma-54 dependent transcriptional regulator, putativechromosome CDS2346648 1542 - 0.457847
NA TDE0496 DNA-binding protein, putativechromosome CDS551061 219 - 0.456621
NA TDE2324 DNA-binding response regulatorchromosome CDS2359328 654 + 0.376147
NA TDE2592 DbpA RNA binding domain proteinchromosome CDS2627166 627 + 0.374801
NA TDE0703 transcriptional regulator, AbrB familychromosome CDS738056 225 - 0.395556
NA TDE1123 sigma factor regulatory protein, putativechromosome CDS1153827 1686 - 0.365362
NA TDE1100 acetyltransferase, GNAT familychromosome CDS1134358 405 - 0.276543
NA TDE0675 conserved hypothetical proteinchromosome CDS714134 858 + 0.40676
NA TDE1670 transcriptional regulator, MarR familychromosome CDS1724003 549 - 0.291439
NA TDE1746 conserved hypothetical proteinchromosome CDS1799564 1242 - 0.39694
NA TDE0332 transcriptional regulator, TetR familychromosome CDS371080 627 + 0.333333
NA TDE1601 transcriptional regulator, TetR familychromosome CDS1652479 648 - 0.353395
NA TDE0222 acetyltransferase, GNAT familychromosome CDS254786 525 - 0.28
NA TDE2187 ParB-like nuclease domain proteinchromosome CDS2221237 402 - 0.39801
NA TDE0713 transcription antitermination protein, NusG familychromosome CDS747249 528 + 0.316288
NA TDE0476 conserved hypothetical proteinchromosome CDS532288 717 - 0.44212
NA TDE2320 RNA polymerase sigma-24 factor, putativechromosome CDS2356400 642 - 0.380062
NA TDE0079 DNA-binding proteinchromosome CDS90185 576 - 0.354167
NA TDE1900 conserved domain proteinchromosome CDS1921264 255 + 0.364706
NA TDE2404 RNA polymerase sigma-54 factor, putativechromosome CDS2429403 1392 - 0.397988
NA TDE0895 transcriptional regulator, AraC familychromosome CDS911317 948 - 0.380802
NA TDE2005 conserved hypothetical proteinchromosome CDS2023916 555 + 0.389189
NA TDE1099 acetyltransferase, GNAT familychromosome CDS1133826 516 - 0.271318
NA TDE1162 ParB-like nuclease domain proteinchromosome CDS1196146 1629 - 0.332719
NA TDE0344 transcriptional regulator, AbrB familychromosome CDS385457 222 - 0.387387
NA TDE0655 response regulatorchromosome CDS691061 699 + 0.353362
NA TDE0191 acetyltransferase, GNAT familychromosome CDS227468 429 - 0.358974
NA TDE2581 hypothetical proteinchromosome CDS2610922 771 + 0.246433
NA TDE0070 RNA polymerase sigma-70 factor, region 2 familychromosome CDS77853 828 + 0.349034
NA TDE1812 hypothetical proteinchromosome CDS1847670 276 - 0.268116
NA TDE0082 transcriptional regulator, MerR familychromosome CDS94024 318 - 0.377358
NA TDE2413 hypothetical proteinchromosome CDS2440413 666 - 0.342342
NA TDE1382 transcriptional regulator, ArsR familychromosome CDS1422140 354 + 0.432203
NA TDE1097 acetyltransferase, GNAT familychromosome CDS1132002 855 - 0.291228
NA TDE0549 TfoX N-terminal domain family proteinchromosome CDS587087 321 - 0.370717
NA TDE2509 transcriptional regulator, AraC familychromosome CDS2533328 885 + 0.263277
NA TDE1858 transcriptional regulator, PadR familychromosome CDS1884772 315 + 0.412698
NA TDE1486 conserved hypothetical proteinchromosome CDS1530439 315 + 0.396825
NA TDE0660 transcriptional regulator, putativechromosome CDS696369 906 - 0.40287
NA TDE2420 DNA-directed RNA polymerase, beta' subunit, putativechromosome CDS2445050 4275 - 0.448187
NA TDE1115 DNA-binding protein, putativechromosome CDS1149128 309 - 0.391586
NA TDE0608 DNA-binding protein, putativechromosome CDS645084 174 - 0.373563
NA TDE2703 conserved hypothetical proteinchromosome CDS2747695 786 - 0.366412
NA TDE1222 iron-dependent transcriptional regulatorchromosome CDS1256131 669 - 0.300448
NA TDE0127 DNA-binding proteinchromosome CDS145890 315 + 0.326984
NA TDE2501 response regulatorchromosome CDS2524913 975 + 0.36
NA TDE0874 transcriptional regulator, putativechromosome CDS897079 516 + 0.459302
NA TDE1170 DNA-binding proteinchromosome CDS1199940 363 + 0.333333
NA TDE1101 acetyltransferase, GNAT familychromosome CDS1134753 480 - 0.297917
fliA TDE2683 RNA polymerase sigma-27 factorchromosome CDS2723457 789 - 0.373891
hypB TDE2165 hydrogenase accessory protein HypBchromosome CDS2197143 663 - 0.399698
mfd TDE1287 transcription-repair coupling factorchromosome CDS1322878 3468 + 0.400519
nusB TDE1657 N utilization substance protein Bchromosome CDS1707320 411 - 0.379562
nusG TDE2426 transcription antitermination protein NusGchromosome CDS2455332 558 - 0.401434
recG TDE2579 ATP-dependent DNA helicase RecGchromosome CDS2603378 2037 - 0.459499
rho TDE1503 transcription termination factor Rhochromosome CDS1551807 1647 + 0.403157
rnc TDE1027 ribonuclease IIIchromosome CDS1057702 741 + 0.421053
rpoA TDE0791 DNA-directed RNA polymerase, alpha subunitchromosome CDS817482 1056 + 0.392992
rpoB TDE2421 DNA-directed RNA polymerase, beta subunitchromosome CDS2449349 3504 - 0.432934
 
Treponema pallidum
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
TP0019 transcription elongation factor (greA)chromosome CDS21558 489 + 0.453988
TP0082 formate hydrogenlyase transcriptional activator (fhlA)chromosome CDS90629 1803 - 0.5269
TP0092 RNA polymerase sigma-24 factor (rpoE)chromosome CDS101622 489 + 0.541922
TP0093 T. pallidum predicted coding region TP0093chromosome CDS102094 648 + 0.552469
TP0111 RNA polymerase sigma-54 factor (rpoN)chromosome CDS126974 1428 + 0.478992
TP0167 cation-activated repressor protein (troR)chromosome CDS188470 462 + 0.508658
TP0212 DNA-directed RNA polymerase, alpha subunit (rpoA)chromosome CDS216003 1056 + 0.493371
TP0218 sigma factor SigB regulation protein, putativechromosome CDS222201 1470 + 0.463946
TP0219 sigma factor SigG regulation protein, putativechromosome CDS223674 2148 + 0.416667
TP0236 transcription antitermination protein (nusG)chromosome CDS242499 558 + 0.528674
TP0241 DNA-directed RNA polymerase, beta subunit (rpoB)chromosome CDS245585 3537 + 0.499293
TP0242 DNA-directed RNA polymerase, beta' subunitchromosome CDS249134 4251 + 0.505999
TP0254 transcription termination factor Rho (rho)chromosome CDS265517 1560 + 0.489744
TP0271 chromosome partitioning protein (parB)chromosome CDS287537 975 - 0.531282
TP0344 transcription-repair coupling factor (trcF)chromosome CDS366459 3423 - 0.496348
TP0380 DNA repair helicase, putativechromosome CDS405261 1821 - 0.548051
TP0431 conserved hypothetical proteinchromosome CDS459063 822 + 0.574209
TP0458 conserved hypothetical proteinchromosome CDS488333 579 + 0.585492
TP0461 T. pallidum predicted coding region TP0461chromosome CDS490476 360 + 0.577778
TP0493 RNA polymerase sigma-70 factor (rpoD)chromosome CDS527891 1836 + 0.490196
TP0511 transcription factor (carD)chromosome CDS547001 627 + 0.497608
TP0665 T. pallidum predicted coding region TP0665chromosome CDS727016 756 - 0.575397
TP0687 DNA recombinase (recG)chromosome CDS752821 2061 - 0.425036
TP0701 DNA-directed RNA polymerase, putativechromosome CDS766966 204 - 0.514706
TP0709 RNA polymerase sigma-28 factorchromosome CDS775888 789 + 0.508238
TP0739 conserved hypothetical proteinchromosome CDS804190 1197 - 0.458647
TP0770 ATP-dependent RNA helicasechromosome CDS835978 1950 + 0.534872
TP0805 exoribonuclease II (rnb)chromosome CDS873482 2280 - 0.555263
TP0809 ribonuclease III (rnc)chromosome CDS877865 765 + 0.568627
TP0892 N utilization substance protein A (nusA)chromosome CDS970473 1458 - 0.496571
TP0924 tex protein (tex)chromosome CDS1002996 2337 + 0.555413
TP1012 RNA polymerase sigma-43 factor (sigA)chromosome CDS1103040 936 - 0.501068
TP1015 N utilization substance protein B (nusB)chromosome CDS1106357 426 - 0.532864
TP1029 T. pallidum predicted coding region TP1029chromosome CDS1123124 687 - 0.614265
 
Treponema pallidum subsp. pallidum SS14, SS14
NameLocus tagProduct / DescriptionGenomic elementTypeBeginLengthStrandGC-content
NA TPASS_0739 hypothetical proteinchromosome CDS805638 1197 - 0.458647
NA TPASS_0093 hypothetical proteinchromosome CDS102091 648 + 0.552469
NA TPASS_0380 possible DNA repair helicasechromosome CDS406441 1821 - 0.548051
NA TPASS_0431 hypothetical proteinchromosome CDS460243 822 + 0.575426
NA TPASS_0770 ATP-dependent RNA helicasechromosome CDS837426 1950 + 0.535385
NA TPASS_0218 possible sigma factor SigB regulation proteinchromosome CDS223384 1470 + 0.463946
NA TPASS_0458 hypothetical proteinchromosome CDS489932 579 + 0.585492
NA TPASS_0665 hypothetical proteinchromosome CDS728470 756 - 0.575397
NA TPASS_0854 hypothetical proteinchromosome CDS926432 4602 - 0.485007
NA TPASS_1029 hypothetical proteinchromosome CDS1124569 687 - 0.612809
NA TPASS_0219 possible sigma factor SigB regulation proteinchromosome CDS224857 2148 + 0.416667
NA TPASS_0461 hypothetical proteinchromosome CDS492075 360 + 0.577778
NA TPASS_0701 possible DNA-directed RNA polymerasechromosome CDS768414 204 - 0.514706
NA TPASS_0709 RNA polymerase sigma-28 factorchromosome CDS777336 789 + 0.508238
carD TPASS_0511 transcription factorchromosome CDS548433 627 + 0.497608
fhlA TPASS_0082 formate hydrogenlyase transcriptional activator FhlAchromosome CDS90626 1803 - 0.5269
greA TPASS_0019 transcription elongation factor GreAchromosome CDS21555 489 + 0.453988
nusA TPASS_0892 N utilization substance protein Achromosome CDS971918 1458 - 0.496571
nusB TPASS_1015 N utilization substance protein Bchromosome CDS1107802 426 - 0.532864
nusG TPASS_0236 transcription antitermination proteinchromosome CDS243682 558 + 0.528674
parB TPASS_0271 chromosome partitioning proteinchromosome CDS288720 975 - 0.531282
recG TPASS_0687 DNA recombinasechromosome CDS754269 2061 - 0.425036
rho TPASS_0254 transcription termination factor Rhochromosome CDS266700 1560 + 0.489744
rnb TPASS_0805 exoribonuclease IIchromosome CDS874930 2280 - 0.555263
rnc TPASS_0809 ribonuclease IIIchromosome CDS879313 765 + 0.568627
rpoA TPASS_0212 DNA-directed RNA polymerase, alpha subunitchromosome CDS217186 1056 + 0.493371
rpoB TPASS_0241 DNA-directed RNA polymerase, beta subunitchromosome CDS246768 3537 + 0.499293
rpoC TPASS_0242 DNA-directed RNA polymerase, beta subunitchromosome CDS250317 4251 + 0.505999
rpoD TPASS_0493 RNA polymerase sigma-70 factorchromosome CDS529323 1836 + 0.489651
rpoE TPASS_0092 RNA polymerase sigma-24 factorchromosome CDS101619 489 + 0.541922
rpoN TPASS_0111 RNA polymerase sigma-54 factorchromosome CDS126971 1428 + 0.478992
sigA TPASS_1012 RNA polymerase sigma-43 factorchromosome CDS1104485 936 - 0.501068
trcF TPASS_0344 transcription-repair coupling factorchromosome CDS367639 3423 - 0.49664
troR TPASS_0167 cation-activated repressor proteinchromosome CDS189653 462 + 0.508658